Octopus sinensis (East Asian common octopus): 115228849
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Entry
115228849 CDS
T07665
Name
(RefSeq) LOW QUALITY PROTEIN: spliceosome RNA helicase DDX39B-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03013
Nucleocytoplasmic transport
osn03015
mRNA surveillance pathway
osn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115228849
09122 Translation
03013 Nucleocytoplasmic transport
115228849
03015 mRNA surveillance pathway
115228849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osn03019
]
115228849
03041 Spliceosome [BR:
osn03041
]
115228849
Enzymes [BR:
osn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115228849
Messenger RNA biogenesis [BR:
osn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115228849
Spliceosome [BR:
osn03041
]
Complex C
Other components
EJC/TREX
115228849
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115228849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
NIL
Motif
Other DBs
NCBI-GeneID:
115228849
NCBI-ProteinID:
XP_029655177
UniProt:
A0A6P7U0W1
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MEVYGLFIKGLNTETVSTVVNDLEIGAVQHQCIPQAILSMDIVCQAKSGMGKTAVYVLST
LHQLEESCTSVNTLVLCHTRELAFQISKEYERFSKYLPNVKVAVCFGGIPMQYDISKLRK
NPQVVVGTPGRILQLTVENHLNLSKCHHFVVDECDKVLDKADMRSDVQDIFRKTPHDKQV
IMFSATLPKSIRPVCLKFMQDVSVFSHVXPLEIYIDDESKLTLHGLQQYYVKLEENAKTR
TLFKLLESLSVNQTIIFVRTVNRCIALTELLLSGNFEVICIHRGMQQEERLKRYQLFKDF
EKRILVATDLFGRGMDIERVNVVFNYDMPDDADSFLHRVARAGRFGTKGIAVTFVSNSTD
NGVLNDVQKRFEVTINELPEKIDPNSYGLLVVFIPRRTEGIARALKSKSPLERCNCDKSV
ERERLDP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtacggactcttcatcaaggggctgaacaccgagacggtctccacggttgtc
aatgacttggaaattggggcagtgcaacaccaatgcattccgcaggccattctgtcgatg
gacattgtgtgtcaggccaagtcgggaatgggtaagactgcagtgtatgtgttgtccact
ctccaccaattggaggagtcgtgcacgagtgtgaacactctcgtgttgtgtcacactcgg
gagttggccttccagatatccaaggagtatgagcgattctccaagtacttgcccaacgtg
aaagtggccgtgtgtttcggggggattcccatgcagtacgacatcagcaagctgaggaag
aacccgcaggtggtggtgggcactcccgggaggattctgcagttgacggtggagaaccac
ctcaacctgagcaagtgtcatcactttgtggtggacgagtgtgacaaagtgttggacaag
gcggatatgcggtcggatgtgcaggatatattccgcaagactccccacgacaagcaggtg
atcatgttcagtgccactctccccaagtccattcgccctgtctgtctcaagtttatgcag
gatgtgagtgtgttctctcatgtgtagccattggaaatatacatcgacgacgagtctaaa
ctcaccctccacggactccagcagtactatgtcaagctggaggagaacgcaaagacaagg
actctcttcaaactgctggagtcactgagtgtgaaccagaccataatatttgtgcggact
gtcaatcggtgtattgcactcaccgaactacttctctcggggaattttgaagtgatatgc
atccaccggggaatgcagcaggaagagagacttaagagatatcaactgtttaaagacttt
gagaagaggatactcgtggctactgacttgtttgggaggggaatggacattgagagggtg
aatgtggtcttcaactacgacatgcctgacgatgcggacagtttcctccatcgagttgcc
agggctggtcggttcgggacgaagggaattgctgtgacatttgtgtccaacagtacggac
aatggagtgctcaatgatgtccagaagaggttcgaagtgaccattaatgagttgcctgaa
aagatcgaccccaacagctacggtttgctcgttgtgtttattcctagacgaacggaagga
atagcaagggctctaaagtccaaatcaccgttggagaggtgcaattgcgacaaaagtgtt
gagcgggaaaggctcgatccttaa
DBGET
integrated database retrieval system
