Octopus sinensis (East Asian common octopus): 115229911
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Entry
115229911 CDS
T07665
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115229911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osn03041
]
115229911
03009 Ribosome biogenesis [BR:
osn03009
]
115229911
Enzymes [BR:
osn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115229911
Spliceosome [BR:
osn03041
]
Complex A
U2 snRNP components
U2 related factors
115229911
Complex B
115229911
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
115229911
Ribosome biogenesis [BR:
osn03009
]
Eukaryotic type
90S particles
Helicases
115229911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
ABC_tran
SRP54
AAA_7
NACHT
TsaE
T2SSE
PhoH
AAA_29
Motif
Other DBs
NCBI-GeneID:
115229911
NCBI-ProteinID:
XP_029656035
UniProt:
A0A6P7U1A5
LinkDB
All DBs
Position
LG2:complement(128388118..128434154)
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AA seq
735 aa
AA seq
DB search
MSKRRIDVGDSSSKRNRDEDRHRESDKDHMKEGRKPEKKISIFEQFNIPKPQIQLNPFTG
LPYTPRYYELLRKRNALPVWEYKDKFTEMVNKNQILVLVGETGSGKTTQIPQWCLEWVRA
RYPKKGVACTQPRRVAAMSVAQRVSEEMDVCLGQEVGYSIRFEDCTSPKTVLKYMTDGML
LREAMSDPLLEAYGVIMLDEAHERTLATDILMGLLKEVSRQREDLKIIVMSATLDAGKFQ
NYFDHAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHICEHCEGDVLLFLTGQEE
IDEACKRIQREIDNFGPEIGDMKCIPLYSTLPPNLQQRIFEPPPAKKANGAIGRKVVVST
NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKC
FRLYTEKAYKNEMQENTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE
LLNYLAALDDDGELTELGSMMAEFPLDPQLAKMVIASCDCNCSNEILSITAMLSVPQCFV
RPMEMKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHEDPQWSYDNFVNFRSMKSADNVR
QQLARIMDRFNLRRSSTEFASRDYYINIRKALVAGFFMQVAHLERTGHYLTVKDNQIVQL
HPSTCLDHKPEWVLYNEFVLTTKNYIRTVTDIKPEWLIHIAPQYYDMVNFPECEAKRQLE
RIISRLSSKQHFEGF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgtcgtattgacgttggtgattcatcttcgaagcggaatagggatgaagat
agacatagagaaagtgacaaagaccacatgaaggaaggcaggaaacccgaaaagaagatt
tcgatcttcgaacagttcaatatccccaaaccacagatacagctaaatccatttacaggc
ttaccttacacacctcgctattatgaacttttgcggaaaagaaatgcattacctgtatgg
gaatacaaggacaaattcactgaaatggtcaacaaaaaccaaatattggtattggtcggt
gaaactggatctggtaaaactacacagattcctcaatggtgccttgaatgggtgcgagcc
cgttatcccaagaaaggtgttgcttgcactcagcccaggcgagtggccgcaatgtcagtt
gcccagcgtgtgtctgaagaaatggatgtatgtcttggacaggaagttggctacagcatt
cgatttgaagattgcacatctccaaagacagttttaaaatatatgacagatggtatgtta
ctccgtgaggctatgtctgacccacttcttgaagcctatggagtgattatgcttgatgaa
gctcatgaacgtactcttgctactgatatattgatgggattgctgaaagaagtcagccgg
cagagagaagacctaaagattattgttatgagtgctacactggatgctggtaaatttcag
aattattttgaccatgctccattgatgaatgtacctggacgaacccatcctgtcgaaata
ttttatacccctgaaccagagagagactacctggaagctgctatccggactgttattcag
atacatatttgtgaacattgtgagggagatgttcttctctttttaactggtcaagaggaa
attgatgaagcgtgcaaacgtatccagcgagaaatcgataactttggtcctgaaattgga
gatatgaaatgcattccactttattcaacactacctcctaatctacagcaaaggatcttt
gaaccaccccctgcaaaaaaggccaatggagctataggtagaaaagttgttgtctctact
aatattgctgagacatcacttactattgatggagttgtttttgtcatagatccaggattt
gctaaacagaaggtatacaaccctcgaattcgtgttgaatcacttttagtaactgctatt
agcaaggccagtgctcaacagagagcaggtcgtgctggccgtacacgaccaggaaaatgt
ttccgactctacactgaaaaggcttacaagaacgagatgcaagagaacacttacccagaa
attcttcgttcaaatttgggatctgttgttttacagttgaaaaagcttggtattgatgac
ttagtgcattttgatttcatggatcccccagctcctgaaaccctaatgcgtgccctagag
ttgctgaattacttggctgcactggatgacgatggagaattaactgaacttggttccatg
atggctgaatttccacttgatccacagctggctaaaatggtgattgcaagctgtgattgc
aattgttccaatgaaatcctttccatcactgcaatgttgtcagtcccgcagtgttttgtg
cgtccaatggagatgaagaaagctgcagacgaagcgaagatgagatttgcacacatcgat
ggcgaccatttgacgctgctcaacgtctaccatgctttcaaacaaaatcatgaagaccca
caatggagttacgacaattttgtgaattttcgatctatgaaaagtgctgataatgtccga
cagcagctggcccggattatggatcgatttaatttgcgtcgctcaagtacagagtttgca
agtcgggactactacatcaacattaggaaggctttggtagctggtttctttatgcaggtt
gctcatcttgagcgcactggtcattatctaactgtgaaagacaaccagattgttcagctc
cacccttccacatgtctcgaccacaagcctgaatgggtcctgtacaatgaatttgtactc
acaaccaagaattacattcgaactgttacagacattaaaccagaatggttgatacacatt
gcacctcaatattatgacatggtcaacttccccgagtgtgaagccaaacgtcaattggag
cgcattatatcacgcttgtctagcaagcaacattttgaaggattttga
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