Octopus sinensis (East Asian common octopus): 115229921
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Entry
115229921 CDS
T07665
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03018
RNA degradation
osn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115229921
09123 Folding, sorting and degradation
03018 RNA degradation
115229921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osn03019
]
115229921
03041 Spliceosome [BR:
osn03041
]
115229921
Messenger RNA biogenesis [BR:
osn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115229921
mRNA degradation factors
5'-3' decay
Lsm complex
115229921
Spliceosome [BR:
osn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115229921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Mlf1IP
Motif
Other DBs
NCBI-GeneID:
115229921
NCBI-ProteinID:
XP_029656045
UniProt:
A0A6P7U1B4
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All DBs
Position
LG2:complement(119938852..120000317)
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AA seq
90 aa
AA seq
DB search
MATTFTNPSQLLPLELVDKCIGSRIHIIMKNDKEIVGSLQGFDDFVNMVLEDVLEFESTP
EGRRVTKLDQILLNGNNITMLVPGSEGPET
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacttttaccaatccttcccagttgttaccgcttgaactggtagacaaatgt
attggatctcgcattcatatcatcatgaaaaatgacaaggaaattgttggttccttgcag
ggatttgatgactttgtcaatatggtgcttgaagatgttctagaatttgaaagcacacct
gaaggacgtagagttacaaaattagaccaaatattgctaaatggcaacaacattaccatg
ttggtacctggtagtgagggtccagaaacttga
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