Odoribacter splanchnicus: Odosp_0022
Help
Entry
Odosp_0022 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_0022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_0022
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_0022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
Motif
Other DBs
NCBI-ProteinID:
ADY31137
UniProt:
F9ZBZ7
LinkDB
All DBs
Position
21445..22011
Genome browser
AA seq
188 aa
AA seq
DB search
MKRYGADRDKEIQRLLQEMPEEGFRLLFDVYHMQLCVYVVQLTDSFQLAEDIVQDFFVAF
WERKYYRAITGNFRSYLYTSVHNAALAVLKKKKLVPMELLTGVPVEIPQEAVLEREELER
QEKELMLKLEKLPKQEIAAIKAVILENKKCVEAALELGMSVNTLKTHLARALKKLRKDYH
LSFLFYSF
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatatggtgccgatagagataaagagatccagagactactgcaagaaatgccg
gaggaagggtttcgtctgctgttcgatgtgtatcatatgcaattgtgtgtgtatgtcgta
cagttgaccgattctttccaattggccgaggatattgttcaggatttctttgtcgctttc
tgggaaagaaaatattatcgcgccattaccggcaattttcgtagttatctgtatacttcc
gtacataatgcagcattggctgttttgaagaagaagaagctggtgccgatggaattactg
acaggagtcccggtggagattccacaggaggctgtcctggaaagggaagaactggaacgg
caggaaaaagaattgatgctgaaattggagaaattaccgaagcaagaaatagctgccatc
aaagcggttatcctggaaaataaaaaatgtgtggaagctgctttggaactcggtatgtcg
gtaaataccttaaagacacatttagcccgggcgttgaaaaaattgagaaaagattatcat
ctctcctttttattttattcgttttaa
DBGET
integrated database retrieval system
