Odoribacter splanchnicus: Odosp_0056
Help
Entry
Odosp_0056 CDS
T01428
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
osp
Odoribacter splanchnicus
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
osp01011
]
Odosp_0056
Enzymes [BR:
osp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Odosp_0056
Peptidoglycan biosynthesis and degradation proteins [BR:
osp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Odosp_0056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
ADY31171
UniProt:
F9ZC31
LinkDB
All DBs
Position
66057..67631
Genome browser
AA seq
524 aa
AA seq
DB search
MIRFLFFAVSCLLYHAVCGVNVVSKDSVASVEQDTVIENQIITDSIPESFLEKLDYYYTS
WYTGKRDSTYYVDSLCIAESCKNIVPCNDSVYLLRLDSLQSAVPLSFNDIVRTYIELYTV
KKRLQVANMLGRSEYYFPIFEEALDAECMPLELKYLPVIESALNPKALSRAGACGLWQFM
YGTGKMYKLEINSYVDERRDPVKATQAAVRYLNDLYAIYEDWILVIAAYNCGPGNVNKAI
RRSGGKKNYWDIYYHLPRETRGYVPAFIAANYVFAYYKEHGIFPIESTLPPMCDSIMVND
ALHFEQIAAKLDFSVEELRDLNPQYRADVIPAGFGKSYALKMPYNHIGSFIDNQDSIFAC
NRSKYFNDNDRTADPKNRIKVHAQALGQDGRARLVYTVKSGDVPGAIAMKFNVRLADLKY
WNNLNKRMTIRPGQKLVVYVPEKKANQYKNKAAYTGKEDNVASAPKVETIDGEFVLYTVR
KGENLWSIAKKYPGVSNKDIMRWNGISENQVKDIRPGQKLKIKI
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatacgttttttgttttttgctgtatcctgtctgctatatcatgctgtatgcggggtg
aatgtggtgtctaaagatagtgttgcttcggtagagcaagatactgtaattgaaaatcag
attataacggattctattccggaatcttttctggagaaattggattattattatacgagc
tggtatacagggaaacgggatagtacttattatgtcgattcgctttgtatagcagagagt
tgtaaaaatattgttccctgtaacgattcggtttatctgttgcgtttggattctttacaa
tctgccgttccattgtcgttcaacgatattgtccgtacgtacatcgaactgtatacggtg
aaaaaacggttgcaggtagccaatatgttaggacggagtgaatattatttccccattttc
gaagaagcgttggatgcagagtgtatgcctttggaactgaaatatttgcctgtaatcgag
agtgctttaaatccgaaagctttatccagggcgggggcctgtggattgtggcaattcatg
tacggcacagggaaaatgtataagcttgaaatcaattcctatgtcgacgaacgccgtgat
ccggtaaaagcaactcaggcggcagttcgctatctgaacgatctgtatgctatttatgaa
gactggattctggtgatagctgcttataactgtgggccggggaatgtcaataaagcgatt
cgtcgttccggaggaaaaaagaattattgggatatatactatcatctgcctagagagacc
cggggatatgtgcccgcttttatcgctgcgaattatgtattcgcttattataaagaacat
ggcattttcccgatagaatcaaccttgccgccgatgtgtgacagtattatggtgaacgat
gctttgcatttcgagcaaattgcggccaagctggatttttctgttgaagaattgcgtgat
ttgaaccctcagtaccgggccgacgttattcctgccggttttggaaaatcgtacgctttg
aagatgccttataaccatatcggtagttttatcgataatcaggattctatttttgcttgt
aaccgcagtaaatatttcaacgataacgatcggaccgccgatcctaaaaaccggattaaa
gtgcatgcacaggctttgggacaggacggacgggcccgtttggtatatactgtgaaaagt
ggtgatgtacccggagctattgctatgaaattcaatgtccgcttggccgacctgaaatac
tggaacaacctcaataaacggatgacgatccggccggggcaaaaattggtggtgtatgta
cctgagaaaaaagccaatcaatacaagaataaggctgcttataccggtaaggaagataac
gtagcctcagccccgaaagtcgaaacgatcgatggtgagtttgtattgtataccgtccgg
aaaggagaaaacctttggtctatcgccaagaaatatccgggagtatcgaataaggatatt
atgcgctggaacggaatctctgaaaatcaggtcaaagacattcgtccgggacaaaagtta
aagataaagatttag
DBGET
integrated database retrieval system
