Odoribacter splanchnicus: Odosp_0095
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Entry
Odosp_0095 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_0095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_0095
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_0095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_23
HTH_40
RhoGAP
TnsD
Nod1
HTH_24
HTH_VMAP-M9
Mycobacteriophage_Gp53
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ADY31209
UniProt:
F9Z2S9
LinkDB
All DBs
Position
106508..107113
Genome browser
AA seq
201 aa
AA seq
DB search
MNDFGNIDPDLQLFGAVRKGDRSAFEQLFQKYYTDLCHYAWTYLDEKSETEDAVQDVFIY
IWNNRETIRLQESFRGYLFSAVKHRVLNILKHQLVERTHSRLLSEYWDDLLKSGYSEEEQ
TQLEQIQHILQSLPQQCRIVFMKSCLEGKKYLEIAEELRISVNTVKSHISKAYREIREKI
AVLKNSNLLLLIACATYKEMK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttcggaaatatagatccagatttacaactttttggggcggtcagaaagggt
gaccggagtgcttttgagcagttgtttcaaaagtattatacagacttgtgccattatgcc
tggacttatctggacgaaaagagtgaaaccgaggatgcggtacaggatgtatttatctat
atctggaacaaccgggaaacgatccgtttgcaggaatccttccgggggtatcttttttct
gccgtcaaacaccgggtattgaatattttgaaacatcaacttgtcgaacggactcattcc
cgtttactgtccgaatattgggacgatctgttgaaatccggttattccgaagaagaacag
acccagttggaacaaattcagcatatccttcaatctttaccccagcaatgccgtattgtg
tttatgaaaagttgtctggaagggaaaaaatacctggagatagccgaggagctccgcata
tcggtgaatacggtgaaatcacatatctccaaagcttatcgtgaaatccgggaaaaaatc
gctgtacttaaaaattcgaacctgttgttactgattgcttgtgcaacttataaagagatg
aagtaa
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