Odoribacter splanchnicus: Odosp_0156
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Entry
Odosp_0156 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_0156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_0156
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_0156
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_40
HTH_24
MJ0235
HTH_23
RNR_N
HTH_Tnp_ISL3
HTH_10
Mycobacteriophage_Gp53
Motif
Other DBs
NCBI-ProteinID:
ADY31268
UniProt:
F9Z2Y8
LinkDB
All DBs
Position
175904..176452
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AA seq
182 aa
AA seq
DB search
MRCKDEQEILTLISCGNPDGLKSLFDLYYKPLCIFAMNFLDSFGESEDIVQDLFVKFWEK
YKDKQFEGSLRAYFFTAVQHNCAKVLKLKNRYNLQLEEEYIDEPVYSEEEFEGECRKLYA
EIARLPEQCRKVFELIVLKDMKYKEVADFLGLSVNTVKTHFARALKQLRSSLQILLVFLL
RK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtaaagatgaacaggaaatattgaccttgattagttgcggtaatccggatgga
ctaaaaagcctttttgatctttattataagcctctttgtatttttgctatgaactttctg
gattctttcggtgagtcggaagatatcgtccaggacttgtttgtgaagttttgggaaaaa
tataaagataaacagttcgagggatcgttgagggcttatttttttactgctgtccagcat
aattgcgcgaaggtgttaaaattgaagaaccgctataatttacagttggaagaggaatat
atcgacgagccggtgtattccgaagaggagtttgaaggagagtgccggaaattatatgcc
gaaatagcccgtcttcccgaacaatgccggaaagtgttcgagctgatcgtattaaaagat
atgaaatacaaagaagtggctgactttctcggtttatctgtgaataccgtaaagactcat
tttgcccgtgcattgaaacaattgcgcagttctcttcaaattctgcttgttttcttactt
cggaaatag
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