Odoribacter splanchnicus: Odosp_0353
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Entry
Odosp_0353 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_0353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_0353
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_0353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
GerE
Sigma70_r2
Sigma70_r4
Sigma70_ECF
SusR_C
Toxin_BN_H
HTH_23
HTH_40
DUF7205
Motif
Other DBs
NCBI-ProteinID:
ADY31448
UniProt:
F9Z4T9
LinkDB
All DBs
Position
421268..421825
Genome browser
AA seq
185 aa
AA seq
DB search
MVEEKEDRFTLFKQGDERIFRQYYEKYYHALCLWVVRIIKEETRMHDIVQEAFIVLWNSR
MIIESELHLKMFLYQVVRNRCFNYLKSKRVEEKYIQEYLQMEEEGGFEDTVLEEEVHRIV
AQEIEKLPEEQRKVVYFHMEGKNNLEIAEIMQISVNTVKTHKARARKTLKNKLDNLFIIT
VLLGL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggtagaggagaaagaagatcggttcacattatttaaacagggagatgaacgtattttt
cggcaatactacgagaaatattatcatgcattatgtctttgggtggtgcggattataaaa
gaagagacaagaatgcatgatatcgttcaggaggcttttattgttttgtggaacagccgg
atgattatagaatctgaactacacctgaaaatgtttctttatcaagtggttcgtaaccgc
tgtttcaactacttgaaaagtaaacgggtcgaggaaaaatatattcaggagtatctgcaa
atggaagaagaagggggtttcgaagatacagtgcttgaagaagaagtacatcgtattgtt
gcacaagaaattgaaaaattacccgaggaacaaaggaaagtggtatatttccatatggag
ggaaaaaataatctcgaaattgctgaaatcatgcagatttctgtgaatacggtgaaaacc
cataaagccagggcccgaaaaacattaaaaaataaattagataatcttttcattatcaca
gtcttgttgggactgtga
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