Odoribacter splanchnicus: Odosp_0424
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Entry
Odosp_0424 CDS
T01428
Name
(GenBank) Crossover junction endodeoxyribonuclease ruvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
osp
Odoribacter splanchnicus
Pathway
osp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Odosp_0424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osp03400
]
Odosp_0424
Enzymes [BR:
osp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Odosp_0424
DNA repair and recombination proteins [BR:
osp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Odosp_0424
RecFOR pathway proteins
Odosp_0424
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
F-box-like
DUF460
Motif
Other DBs
NCBI-ProteinID:
ADY31515
UniProt:
F9Z5E4
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All DBs
Position
complement(503441..503998)
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AA seq
185 aa
AA seq
DB search
MEKLIMGIDPGTNFMGYAIIKVFGKNQKPELVVSGIVDMIKITDPYIKLQRIFSRTLQVI
DSYQPDELAIEAQFYGKNVQSMLKLGRAQGVAIAAALQRDIPIFEYAPRKIKMSVTGSGT
ASKEQIALLLGKFMTLHTTSEMLDETDAIAIAYCHYLQSCNPLTSAGHTCKSWNDFIKKN
PDKLV
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattaattatgggaatcgaccccggtaccaactttatgggatatgcgatcatc
aaagtattcggaaaaaaccaaaaaccggaattagtagtatcgggaattgtagatatgatt
aaaattacagacccttatatcaaacttcagcggatattcagccgtaccctacaagtgatc
gatagttatcaaccggatgaactggcgatagaagctcagttttatggaaagaacgttcaa
tccatgctaaaactcggccgggctcaaggggttgctattgcagctgctctccaaagagat
atccccattttcgaatatgctccacggaagattaaaatgagtgttaccggttcgggaacc
gcctcaaaagaacaaatcgcccttttactaggtaagtttatgactttacacaccacctca
gaaatgctggacgaaacagatgctattgctatcgcttattgtcattatctgcaaagttgt
aatccgctgacttcagcagggcatacctgtaaatcctggaacgatttcatcaagaagaat
ccggataaactagtctga
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