Odoribacter splanchnicus: Odosp_0619
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Entry
Odosp_0619 CDS
T01428
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
osp
Odoribacter splanchnicus
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osp03400
]
Odosp_0619
DNA repair and recombination proteins [BR:
osp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Odosp_0619
Archaeal homologous recombinant proteins
Odosp_0619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
DUF5798
ABC_tran
AAA_22
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ADY31702
UniProt:
F9Z6R5
LinkDB
All DBs
Position
complement(731072..734797)
Genome browser
AA seq
1241 aa
AA seq
DB search
MKILRIQGKNLASIAGEFDIDFTAAPLRSAGIFAICGPTGAGKSTILDAICLALFNNMPR
TTGIEGTKMPDVGQEFIQQGDRRQILRRGTAEAMAAVEFIAVDGKSYRSVWRVWRANNKI
SGKLQPAELRVYPLGDPSPITTGISESENKLIQLIGLNYNQFTRTVLLAQNEFARFLKAR
KEEKAEVLEKLTGTEIYSVISNTVYSKTTAIRNEWKELSARMGNIRLLTQEEIETLQQQS
AKLLKHEKALQQKNEEIQRKIRWIEQLEQINQSKSEAQATLSDAQKVQAEAQAQSVWLQQ
MESIESSRLFWIEKNECTTHLVSQTELLRQTEQALSDLNEKATQTLQSVERQKSLVNQYT
TQYNKLKPELLEARRLDIGIVNARQVEQESRKTLTDLQDKIKVHQKIQDSRYSRILQQRE
LDDKLKEWFRKNRQHEQMCLNIKLIESFLDTAYTQRLQVIENQSLYTSTLQQLTVSRQQL
ELQRREIETSIQRHNDLLQLRQQQQISVNRFPISELRNRKEQLRLQRERLLQEITLTEKL
DKTRQELRKRQDKLQQQQQNLQALKVRLTEYKKEIEIAEIKYTTIRHTLEQARLSVSENV
VRLRAQLEENTPCPVCGSQSHPYAAHHPLADGLLETLEKEVRQHEAAYNRLKTENARLEA
EHRYLGEVLPVLQNEKYESQEECEEIHQQIKELYSDRSVSNGQNRINLREQLNISQKELE
SICLKENEWEQRQHQLETLQKELDKIQNQNNALQKTFQQTQEKVVGQATELSKLQEIIEG
LKVQQNISLEKVAPFMHAPTWRQRWEDNYPDLKQELTTAAQKWQTKTLQSAENEKLLLQS
VAEYEENQKNLESFRQSETEAAEALKKRSEETLSFIRKRARLLQGQTVDETERYWQELTE
RATQELETAIRQKEQLSGQSEQLKGKITQLRTTCDQYQKRLEKATRQLGEWLEKYNRTAP
AQLTEATLISLLQVAPEKIREERERQNHLRDKVTTALATLREREKQLADHLQSPGRPDPQ
SESLSSLQRQYTALQEESERILQQKTEVLATLHTQEENQKQAATLKDTLDAKTKLLNQWS
KLDELIGSQSGYKFKEIAQGYTLDILLSYANIQLRELTSRYQLQRIPDELALQVIDHDLC
DEARSVFSLSGGESFLISLALALGLSSFSSRNHFEENLFIDEGFGTLDSETLQIVMEALE
RLRSQGRQVGIISHVQELTERIPAKICLVKTGNGKSKVVVE
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattacgtatacaaggaaaaaatctggcatctattgccggagaattcgatatc
gattttacggcagctcctctgcgatctgccgggatcttcgcaatatgcggtcccaccggt
gccggaaaatcgactattctggatgctatctgtctggccttattcaacaatatgccccgc
accaccggtattgaaggtactaaaatgccggatgtcggacaagaattcattcaacaggga
gatcgtcgtcaaatactccgcagaggtactgccgaagcgatggctgctgtagaatttatt
gctgtagacggaaaaagttatcgctcggtatggcgggtatggcgagccaataataaaata
agcgggaaacttcaacctgcagaactccgggtatacccccttggagatccgtctcctatc
actacaggaatcagtgaatcggagaataaattgattcaactcatcggtctgaattataat
caattcacccgtaccgttttattggcacaaaatgaatttgcccgattcctcaaagcccgg
aaagaagaaaaggccgaagtactcgaaaaactgaccggtactgaaatctattctgttatc
tcgaatacggtctattccaaaacgacagctatccgcaatgaatggaaagaactctccgcc
cgtatggggaatattcgcctgcttacccaggaagaaatcgagacattacagcaacaatcg
gccaaactcctgaaacacgaaaaggctcttcaacaaaaaaatgaagaaatccaacgtaaa
atacgttggatagagcaattagaacaaatcaatcaatctaaatcggaagcccaggccacc
ctttcggatgcccaaaaagtacaagccgaagcacaagcccagtcagtctggttacagcag
atggaaagcatcgaaagcagccgtcttttttggattgaaaaaaatgaatgtaccactcat
ttagtaagccaaactgaattattacgacaaacagaacaggcgctctccgatctgaacgaa
aaagccacgcaaacccttcaatcggtggaacggcaaaaatcattggtaaaccaatataca
acccagtacaataagcttaaaccggaacttttagaagcccgtcgtttagatatcggaatt
gtcaatgcccggcaggtagaacaagagagccggaaaactttaaccgacctgcaagataaa
atcaaagtgcatcaaaaaattcaggatagcagatactcccgtattctgcaacagagagaa
ttagacgataaattaaaagaatggttcaggaaaaacaggcaacatgaacaaatgtgcctg
aacataaagctgatcgaaagttttctggatacagcttatacccaaaggttgcaggttata
gaaaatcaatctttatatacctctactctacaacaactaacagtaagccggcaacagctg
gaacttcaacgccgtgagatcgaaacatccatacaacgtcacaatgacctcctgcagttg
cgccagcaacaacaaatatcggtcaaccggtttcccataagcgaacttcgcaatcgtaaa
gaacaactccgcctacaacgcgaaagattgcttcaggaaattaccttgacggaaaaacta
gataagacccggcaagaactgagaaaaaggcaagataaactgcaacaacaacaacaaaat
ttacaagcactcaaagttcgcctgaccgaatacaaaaaagaaatcgaaattgcagaaata
aaatacacgaccatacgccacactttggaacaagcccgactatcggtttcagaaaatgtc
gttcgactccgggcccaactggaagaaaataccccttgcccggtatgtggcagccaatcc
cacccttatgcggcacatcatcccctggccgacggcttgctcgaaacactcgaaaaagaa
gtcagacagcatgaagcagcatataatcggttaaaaaccgaaaatgcgcgtcttgaagcc
gaacaccggtacctcggagaagtattacccgtattacaaaatgaaaaatatgaatcgcaa
gaagaatgcgaagagattcaccagcaaatcaaggagctttattcggataggtctgtttct
aacggacaaaatcggataaacctaagagaacagctgaatatcagccaaaaagaattggaa
agtatttgtctgaaagaaaacgaatgggagcaacggcaacatcagttagaaacgctccaa
aaagaactggataaaatacaaaaccaaaacaatgccctgcaaaaaacatttcagcagacc
caggaaaaggtagtcggtcaagccactgaactatctaaattgcaagagatcattgaaggc
ctgaaagtccagcaaaatatttcactggaaaaggtcgctccttttatgcatgcacctacc
tggcgacaacgctgggaagataactacccggatctcaaacaggaactgaccacagctgct
caaaaatggcaaactaaaacgctgcaatcggcagaaaatgaaaaactattgcttcaatcg
gtagctgaatacgaggagaatcagaaaaacctggaatccttccgccaaagcgaaacagaa
gccgcagaggctttgaaaaaacgctctgaagagactttgtctttcatccggaaacgggcc
cggcttctgcaaggtcaaacggtcgatgaaaccgaacgttattggcaagagttaacagaa
agggcgactcaggaactggaaacagccatccggcagaaagaacagctttcaggccaatcg
gaacaactaaaaggaaaaatcacccaactccgtaccacctgtgaccaatatcaaaagcgc
ctggaaaaagccacccggcaattaggcgaatggctggaaaaatacaatcggacagcccct
gctcagctaaccgaagccactctcatttcactattgcaagtggcacctgaaaaaatccgg
gaagaacgggaaagacaaaatcacctccgggataaggtaacgactgctttggccactcta
cgggaacgtgaaaaacaattggccgatcatttacaatcgcccggccgccccgatccacaa
tcggaatcactttcctctttacagcgtcaatacaccgcattacaagaggaatccgagcgt
atcctccaacaaaaaaccgaagtattggcaactctgcacacccaggaagaaaaccaaaaa
caagcggccaccttaaaggataccctcgatgcgaaaacgaaattattaaaccaatggagc
aaactagacgagctaatcggttcacagagtggctataagtttaaagagatcgcccaagga
tatacgctggatatcctgttatcatacgccaatatacaacttcgggaattaacctcccgc
tatcagttgcagcgtatacccgatgagttggccctacaagtcatcgatcacgatctctgc
gatgaagcccggtcggtattctctttatcgggaggcgaatccttcctcatctctctggct
ttagccttgggcttatcttccttttcttcacggaatcatttcgaagaaaatctctttatc
gacgaaggtttcggcactttagacagcgaaaccctgcaaattgtcatggaagccctggaa
cgtctccgctcacaaggccggcaggtgggaatcatatcccacgtacaggaattgaccgaa
cgtattcctgccaaaatttgtctggtaaagaccggcaacggaaagagtaaagtcgttgta
gaataa
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