Odoribacter splanchnicus: Odosp_0747
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Entry
Odosp_0747 CDS
T01428
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
osp
Odoribacter splanchnicus
Pathway
osp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Odosp_0747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osp03019
]
Odosp_0747
03400 DNA repair and recombination proteins [BR:
osp03400
]
Odosp_0747
Enzymes [BR:
osp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Odosp_0747
Messenger RNA biogenesis [BR:
osp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Odosp_0747
DNA repair and recombination proteins [BR:
osp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Odosp_0747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
TniB
SNF2-rel_dom
Response_reg
GntR
HEM4
Mito_morph_reg
Motif
Other DBs
NCBI-ProteinID:
ADY31825
UniProt:
F9Z7X1
LinkDB
All DBs
Position
complement(882438..884339)
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AA seq
633 aa
AA seq
DB search
MHNRIHEILKQYWGYDEFRSLQEEIILSVLEGKDTLALMPTGGGKSITYQVPALVLEGIC
LVVTPLIALMKDQVEELQKRGIVAEAIYTGMGKEQIESTLNKAIAGKIKFLYVSPERLAS
EQFRARLKQMHLSMLAVDEAHCISQWGYDFRPSYLRIAEIRENFRQIPVLALTATATPRV
AEDIQQQLKFEVPHVLSKSFRRDNIAYVVRKANDKLGELLHILSSLKASAIVYVRKRAGA
EELARFLKAKGIEADFYHAGLTSFQREQKQEAWKKGEVPVIVATNAFGMGIDKPDVRIVV
HFDIPDSPEAYFQEAGRAGRDGKKAYAVLLYNEAALTALKKRVTQGFPDKNYIRQVYRLL
GDFFGLEEGLGHGLAFEFDPEHFVKTYKLELTTTLSAIKVLQVAGYLECTTEVHARSRIS
FLVLRDQLYKIELGDLLLERLVEYILRNYPGIFVQYAYIDEEILAGKLGVKRQQVYESLL
LLARRRIIGYIPGNDRPYIVYHQPRVPAHYLHIGPEAYEDRKQAYAVKVGHMAGYIELTD
SCRQLYLMAYFGQREKEVCGICDLCLEQKKRPGNTNRKTEEKILELLKQKDYEIRELIYE
SAGSRQQATACIRKLLDAGEIYYKTPTLLALRH
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcataacaggattcacgaaatattgaaacaatactggggatacgatgaattccgtagt
ctgcaggaggagattattctctcggtattggaggggaaggatacgctggctttgatgccg
accggtggaggaaagtcgattacctaccaggtacctgccttggtgttggaggggatatgc
ctggtggtgacgcccttgatcgctttaatgaaagatcaggttgaagaattgcaaaagcgg
ggaattgtggcggaggcgatttataccggtatggggaaagaacagatagaatcgaccctg
aataaagcgattgccggaaaaatcaaattcctgtatgtttctcccgaacgattagcttcg
gaacagtttcgcgcacgtctgaaacaaatgcatttgtccatgctggcagtcgacgaagcc
cattgtatttcgcaatggggctatgatttccggccttcatatctgcggatcgctgaaatc
cgggagaatttccggcagattccggtattggcattgacagctaccgctactccccgggta
gccgaagatatccagcaacagttaaaatttgaggtcccccatgttttatcgaaaagtttc
cggagggataatatcgcttatgtagtccggaaagcgaacgataagttgggagaattattg
catattttatccagtctgaaagccagcgcaatcgtgtatgtgcgcaaaagagcgggagcg
gaagagttggcccgttttttgaaagcgaagggaatagaagctgatttttatcatgccgga
ctgacttcttttcaaagagaacaaaaacaggaggcgtggaaaaaaggtgaagtcccggtg
attgtcgcaacgaatgctttcggtatgggaatcgacaaaccggatgttcggattgtcgtt
catttcgatattccggatagtcccgaggcctatttccaggaagccgggagagcaggacgg
gacggtaagaaggcttatgcggtattgttatacaacgaagctgctttgacagccctgaaa
aaaagagtcactcagggatttcccgataaaaattatatccgtcaggtgtatcgcctgttg
ggggattttttcggattggaggaagggttagggcatggactggcttttgagttcgatcct
gaacattttgtgaagacttataagctggagctgaccactaccttgtcggcgataaaagta
ttgcaggtagccggttatttggaatgtaccaccgaagtacatgcccgttcgcgtatcagt
ttcctggttttgagagatcaattgtataaaatagagttgggggaccttttattggaacga
ttggtggaatatatacttcggaattatccggggatttttgtgcaatatgcttatatcgat
gaagaaatactggccgggaagttaggggtgaaaagacaacaggtctatgaaagtctgttg
ttattagcccgtcgcaggatcatcggttatattcccggtaatgaccggccttatatcgtt
tatcaccagccccgggttccggctcattacctgcatatcggtcccgaggcctatgaggac
aggaaacaagcttatgctgtaaaagtcgggcatatggccggatacatcgaattaaccgat
tcctgtcgtcaattgtatttgatggcttatttcggacaacgggaaaaagaggtttgcggt
atttgtgacctttgtctcgaacagaagaaacgaccgggaaataccaaccggaaaaccgag
gagaagatccttgagctgctgaaacaaaaagattatgagatcagggaactgatctatgaa
tcggcgggttcccgacagcaagcgacggcttgtatccgcaaacttttggatgcaggtgaa
atttattataaaactccgacactactggctttacgtcattaa
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