Odoribacter splanchnicus: Odosp_0986
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Entry
Odosp_0986 CDS
T01428
Name
(GenBank) pseudouridine synthase Rsu
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
osp
Odoribacter splanchnicus
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osp03009
]
Odosp_0986
Enzymes [BR:
osp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Odosp_0986
Ribosome biogenesis [BR:
osp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Odosp_0986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ADY32056
UniProt:
F9Z9Q6
LinkDB
All DBs
Position
complement(1163585..1164808)
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AA seq
407 aa
AA seq
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MERDYNKNRRSFRSERSENRRGYGAEQGERHTAGSVGNRNTARRFERTSERDNGERRERN
FNREKDTYRERPAKFSNRRDYRPSTEATDRQDRTERSERKVLVKRDSHTDNPRRPRIFRP
RGEETTGNNHSNYNRPFDRDRKKISGREKEGLRQKHYSKKKLLAHRLKNEDENAELRLNR
YISMGGVCSRRDADELIVAGRVKVNGEVVQTVGLKVRKKDKVEVDDVQIFPEKKVYLVLN
KPKDYVTTVEDPLERKTVMALVEGACKERIYPVGRLDRQTTGVLLFTNDGDLAKKLTHPK
YDHKKIYHVFLDRVLTEEDFQAIANGVQLEDGFIKADEISYTSPDCTEVGIEIHSGKNRI
VRRIFEHFGYQIIKLDRVYFAGITKKNLPRGTWRFLTPKEVTMLKVY
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagattataataaaaatcggcgttcttttcgttccgaacggtctgaaaaccgt
agaggatatggagcagagcaaggagaaagacatacggccggatctgtggggaaccgtaac
actgccagaaggtttgaaaggacttctgaacgggacaacggagaaagaagagaacggaat
tttaaccgggagaaagatacttacagagaacgtccggctaaattcagtaaccgccgggat
taccgtcctagtacagaggcaaccgaccggcaggaccggaccgaacgttcggaacggaag
gtattggtgaaacgtgattctcatacggataatccacgcagaccacgtattttccggcca
agaggtgaggagaccaccgggaacaatcattcgaattataatcgtcctttcgaccgcgat
cggaaaaagatttccgggagagagaaagaaggactgagacagaaacactatagtaaaaag
aaattgttggctcatcggctgaaaaatgaagatgagaacgccgaattgcgtctgaatcgc
tacatttcaatgggaggcgtatgttctcgtagggatgcggatgaattgatcgttgccgga
cgggtgaaggtaaacggagaggtagttcagaccgtcggtttgaaagtacggaagaaagac
aaggtggaggtggacgacgttcagattttccccgaaaagaaagtatatctcgttttaaat
aaaccgaaagattatgtgacaaccgtcgaggatccgttggaacgtaagacggttatggcc
ttggtcgaaggtgcttgtaaagaaagaatctatccggtagggcgtctggaccggcagacg
acaggagtgttgttgtttacgaatgacggcgatctggctaagaaattaacccatccgaaa
tacgatcacaaaaagatatatcatgtttttctggatcgtgtattgactgaagaagatttt
caggctatagcgaatggagtccagctggaagacggatttatcaaagcggacgagatcagt
tatacctctccggattgtactgaagtggggatagagattcattccggaaaaaatcgtatc
gtcagacgtatatttgaacatttcggttaccagatcataaagctcgaccgggtatatttt
gccggtattacgaaaaaaaatctgccgcggggaacatggcgtttccttactccgaaggaa
gtgactatgctgaaagtttattaa
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