Odoribacter splanchnicus: Odosp_1043
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Entry
Odosp_1043 CDS
T01428
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
osp
Odoribacter splanchnicus
Pathway
osp03030
DNA replication
osp03430
Mismatch repair
osp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Odosp_1043
03430 Mismatch repair
Odosp_1043
03440 Homologous recombination
Odosp_1043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osp03032
]
Odosp_1043
03400 DNA repair and recombination proteins [BR:
osp03400
]
Odosp_1043
Enzymes [BR:
osp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Odosp_1043
DNA replication proteins [BR:
osp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Odosp_1043
DNA repair and recombination proteins [BR:
osp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Odosp_1043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
ExoX-like_C
Rv2179c-like
DUF2039
Motif
Other DBs
NCBI-ProteinID:
ADY32110
UniProt:
F9ZA84
LinkDB
All DBs
Position
complement(1245041..1245823)
Genome browser
AA seq
260 aa
AA seq
DB search
MKLNLANPIVFFDLETTGINIAKDRIVEISVLKVYPNGKEEQKTIRVNPGMHIPEEASAI
HGIYDEDVKDAPMFKHIARELAHYIEGCDLGGYNSNRFDIPLLAEEFLRAEVDFDMSKRK
FVDVQTIFHKMEQRTLSAAYHFYCDKCLEDAHTAAADTMATYEVLMAQLDRYGEKLENNI
DFLSKFSTQNKNVDFAGFIIYDDKGVEVFNFGKNKGVPVEKVLKEQQGYYDWMIKSDFPL
YTKKVLTKIKLRSSGLVKGV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaatttagctaatcccatcgtttttttcgatctggaaaccacgggaatcaat
attgctaaagaccggatcgtggaaatttcggtattgaaagtgtatccgaacggtaaggag
gaacaaaagaccatccgggtgaatccgggaatgcatatccccgaagaagcgtctgctatt
catggcatttacgatgaagatgtgaaagatgcaccgatgttcaagcatattgcccgcgaa
ttggcgcattatatcgaaggatgtgatttgggaggatataattcgaatcgtttcgatatc
cccttattggcagaagaatttttgcgtgcggaggtggatttcgatatgagtaaacggaag
tttgtagatgtacaaactattttccacaaaatggaacagcgtaccctgtcggctgcctac
catttttattgtgataaatgtcttgaagatgcccatacggctgcagccgacacgatggct
acctatgaggtgctgatggcccagctggatagatatggggaaaagctggaaaataatatc
gatttcttaagtaagttttctacccaaaacaagaacgtcgactttgccggttttattatt
tatgacgataaaggggtagaagtgtttaacttcggtaagaataaaggagtgcctgtagag
aaggtgttgaaagaacaacagggatattatgattggatgatcaaaagtgatttcccactt
tataccaaaaaggtgttgactaagattaaactgagaagttccgggttagtaaaaggggtg
tag
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