Odoribacter splanchnicus: Odosp_1447
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Entry
Odosp_1447 CDS
T01428
Name
(GenBank) putative helicase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
osp
Odoribacter splanchnicus
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osp03009
]
Odosp_1447
03012 Translation factors [BR:
osp03012
]
Odosp_1447
Enzymes [BR:
osp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Odosp_1447
5.6.2.5 RNA 5'-3' helicase
Odosp_1447
Ribosome biogenesis [BR:
osp03009
]
Eukaryotic type
Other ribosome biogenesis factors
Odosp_1447
Translation factors [BR:
osp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Odosp_1447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
Viral_helicase1
AAA_16
UvrD-helicase
AAA_22
nSTAND3
Helicase_RecD
SLFN-g3_helicase
DEAD
AAA_25
AAA
PhoH
UvrD_C_2
ATPase
ResIII
T2SSE
Herpes_ori_bp
AAA_28
AAA_14
NPHP3_N
cobW
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ADY32483
UniProt:
F9Z3T0
LinkDB
All DBs
Position
complement(1715503..1717386)
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AA seq
627 aa
AA seq
DB search
MDKLLSPMQDLQQQSAMLQKEYEYEKELYRQQTREAGIPKRIQQGVCWFPVKLGADRYNS
LNQLTVEVTRTETEETEHSFEYGCPVCFFRISADRQIRYFNFSAVISYVQDNKMVVVLPG
PQVLPELVVTGELGVQLYFDDTSYKTMFAALREVAEAKGNRTARLREVLLGKAPALRRET
GPVRFPWLNASQEKAVNQVLCAKEVAVVHGPPGTGKTTTLVEAVYETLHRENQVMVSAQS
NTAVDWIAEKLVDRGIPVLRIGNPTRVNDKMLAFTYERRFEAHSDYPELWQIRKTIREMT
GRLRKSGREDRERLHNQLTKLRVRATGLEIRIDTELFTEARVIACTLVGAASRVLERKRF
SSLFIDEAAQAIEAACWIAISRADRVILAGDHCQLPPTIKCIEAARGGLGRTLLEKVVLH
KPETVSLLKIQYRMHEDIMRFPSRWFYHDELEAAPEVKYRGILDFDTPVSWIDTSELDLQ
EKAVAEGTGRLNTGEAELLVRELKNYMERIGIRRILEEHIDFGVISPYRAQVHYLRHLLK
KEPFFRPCRRLITVHTVDGFQGQERDVIMISLVRANEKGQIGFLRDLRRMNVAITRARMK
LLILGEAVTLTRHPFYRELYEYIGGLR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggataaattactttctccgatgcaggatttacaacaacaatcggccatgctgcaaaaa
gaatacgaatatgaaaaagagttgtatcgtcagcagacccgtgaggccggtattccgaag
cgaatccagcagggagtgtgttggtttccggtgaagctgggggccgatcggtataattca
ctcaaccagctgacagtcgaagtaacgcgtacagagacggaagagactgaacatagcttt
gaatacggatgtcctgtttgtttttttaggatttcggctgataggcagatccgttatttc
aacttttctgccgtgatcagttatgtacaggataataaaatggtagttgtacttcccgga
ccgcaggtattgccggaattagtcgttacgggtgagttgggggtacagttgtattttgac
gatacttcgtataagacgatgttcgctgccctgcgtgaggtggcagaggcaaagggaaat
cgtacggctcgtttgcgggaggtattgctgggtaaagcacctgcacttcggcgggagacc
ggtccggtgcgtttcccctggctgaatgcttcgcaggagaaggcagtgaatcaggtgttg
tgtgcaaaagaggtggctgttgtacacggacctcctggaaccggtaagacgacgacattg
gtggaggctgtttatgaaacccttcaccgtgaaaatcaggtgatggtgtctgcccagagt
aatacggcggtggattggattgcagaaaaactggtcgatcggggtatccccgtgcttcgt
atcggaaatcctacccgggtaaacgataagatgctcgcttttacttacgaacgtcgtttc
gaggcacatagcgactatccggaattgtggcaaattagaaagactatacgggagatgacc
ggccgtttacgtaaaagcgggcgtgaagaccgggagcgtttgcataatcagctgactaaa
ttgcgggtaagggcgaccggcttggagatacgtatcgatacggagttgtttaccgaagcc
agggttatcgcctgtaccttggtgggtgcggctagccgggtattggagcgcaaacgcttt
tcttctttgtttatcgatgaggctgcccaggcgatcgaagcggcttgttggatcgcgatc
tcccgggccgaccgggtgattctggccggcgatcattgccagctaccgccgacgatcaaa
tgtatagaggctgcccggggagggctcggccgtactttgctggagaaggtggtgctgcac
aaaccggagaccgtgtctttgttgaaaatccaataccggatgcatgaagatattatgcgc
ttcccttcccgctggttttatcatgatgagttggaagcggcaccggaagtgaaataccgg
ggtatcctcgatttcgatacgcctgtcagctggatcgatacttccgaactggatttacag
gaaaaagcagtggcagaaggaaccggacgtctgaataccggagaagccgaattgttagtc
cgggaactgaaaaattatatggaacggatcggaatccggcgtattttggaggagcatatc
gatttcggggtgatatcaccttatcgggcacaagtccactatttaaggcatctgttgaaa
aaagagccgttctttcgtccttgccgtcgcctgatcaccgtgcatacggttgatggtttt
caagggcaagagcgggatgtgattatgatcagtctggtcagggccaacgaaaaagggcag
atcggtttcttgcgggatctgcggcgtatgaatgtagccattacccgggcccggatgaaa
ttactgattttgggcgaagcggtgacgttgaccagacatcctttttaccgcgagttgtat
gaatatatcggtgggctccggtga
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