Odoribacter splanchnicus: Odosp_1593
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Entry
Odosp_1593 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_1593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_1593
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_1593
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_VMAP-M9
KORA
HTH_17
DUF5497
F_actin_cap_B
TMEM206
HTH_23
Sigma70_ECF
GerE
HTH_26
HTH_10
Rv2175c_wHTH
HTH_Crp_2
Mycobacteriophage_Gp53
Crp
Motif
Other DBs
NCBI-ProteinID:
ADY32618
UniProt:
F9Z507
LinkDB
All DBs
Position
1889172..1889774
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AA seq
200 aa
AA seq
DB search
MWRSKMEKTKNRAGKKERFEHIYKEYSKPMYLYALSFLVSEEEAEDAIQEVFINFWKDDT
YQKIQNEVTKTYLFRSVKNNCLNRLKKKDVLRDRLDLFREDVAEEEMMMWNDTLIQEVGT
AIEEMPEQTREIIQGVFFREMKYQEVADYLGISINTVKTLLKNGMRHLRERFAERVDLFL
IIVLIKKVGIQRKEKESFIE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgatcaaagatggaaaaaacgaaaaatagagcaggaaaaaaggaaagattcgag
catatttataaagaatactcgaaaccgatgtacctgtatgctcttagttttttggtctcg
gaggaagaagcggaggatgcgattcaggaagtgtttattaacttctggaaagacgataca
taccagaaaatccagaatgaagtaacgaagacttacctgttccgatcggtaaaaaataac
tgtttgaaccggctgaaaaagaaagatgtgttgcgagaccgcttagatttgttccgggag
gatgtcgcagaggaggaaatgatgatgtggaatgacacgttgatccaagaagtgggaact
gcaattgaggaaatgcctgaacagacccgagaaattattcaaggtgtattttttcgggag
atgaaatatcaggaggttgcagactatctgggtatatctataaatacagtgaagacgttg
ttaaagaacggtatgcgtcaccttcgggaacgctttgccgagcgagtggatctattcctt
attattgttttaataaaaaaagtaggtatacaaaggaaggaaaaggaaagttttattgaa
tga
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