Odoribacter splanchnicus: Odosp_1892
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Entry
Odosp_1892 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_1892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_1892
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_1892
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_30
HTH_23
HTH_24
HTH_8
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ADY32901
UniProt:
F9Z7H6
LinkDB
All DBs
Position
2262272..2262844
Genome browser
AA seq
190 aa
AA seq
DB search
MEKEQNILKELQEGDEQAYKDLFATYFADLVLYANHFLKNQAASEDIVQDFFITFWFEKK
FSGIESDLRGYLYRSLRNTCLNHLRNEQRKQEKLSHIPVEKESVTLMTAELEDKEREHQQ
LYKALHQLPEQCKQVFTLCCLQDMKYREAADLLGISINTVRTQMGRAYKILRNSLDSKSF
LNLLFLRFLK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaacagaacattctgaaagaattgcaggaaggagacgaacaagcctacaaa
gacttgtttgcgacctatttcgccgacttggtgctatatgccaaccactttttgaaaaat
caggcagcatctgaagatattgtccaagattttttcatcacattctggtttgaaaagaag
ttctcaggtatagaaagcgacttaagaggttacctctatcgctccctacgcaacacctgt
ctgaatcatttacgcaatgaacagcggaaacaagagaagctttcacacatacccgttgaa
aaggaatcggtcactcttatgacagcggaattagaagacaaagaacgagagcatcaacag
ctttacaaggctcttcatcaactgccggaacagtgcaagcaggtgttcaccctctgttgt
cttcaagacatgaaatatcgggaagcagccgatctccttggaatttcaatcaatactgtg
cgaacacaaatgggacgtgcttacaaaatcctacgcaattcattggatagcaagtcattt
cttaacctgctattcctacgtttcttaaaatag
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