Odoribacter splanchnicus: Odosp_2206
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Entry
Odosp_2206 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_2206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_2206
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_2206
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
GerE
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ADY33205
UniProt:
F9Z9Y4
LinkDB
All DBs
Position
complement(2633589..2634185)
Genome browser
AA seq
198 aa
AA seq
DB search
MFGKTTEDTVSEQKDFLQRFNLKDEQAYHKLFQQFYSYLVLFAERRVENHKVAEDIVQEI
FINIWESNKQYNSINGFKAYLYEAVSNRCADYWKHRAVEEKYTAHVLYEQKLPDFSVQEE
EILRELYAAIGELPQRSQEVILLSLEGKKNQEIAQLLNLSVLTVKTHKKNAFRYLKNRLR
NLVLLVMIMQISKKDILP
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgttcggtaaaacgacggaagacactgtgagcgaacagaaagattttttgcagcgcttt
aacttgaaagacgaacaagcttatcataaactctttcagcaattttatagttaccttgtc
ctttttgcggaacgcagagtggaaaatcacaaggtggctgaagatatcgtgcaggaaatc
tttatcaatatctgggaaagtaacaaacaatacaattctatcaacggatttaaagcttat
ttgtacgaagccgtctcgaaccgttgtgcagattactggaaacaccgggcagtcgaagaa
aaatacacggcacatgtgctttatgaacaaaaactacccgatttttcagtgcaagaggaa
gaaatattgcgggagttgtacgcagccatcggtgaattgccgcaacgtagccaggaggtc
attcttttatctttagagggtaagaaaaatcaggaaatagcccaactgctgaatctgtct
gtgcttactgtcaaaacccataagaaaaatgctttccgttatttaaaaaatcgactgcga
aatctggtactgttagttatgattatgcagatttctaaaaaagatatcctgccataa
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integrated database retrieval system
