Odoribacter splanchnicus: Odosp_2286
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Entry
Odosp_2286 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_2286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_2286
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_2286
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
Sigma70_r4
Sigma70_ECF
HTH_40
HTH_23
DNA_pol3_delta_C
TnsD
MA3
TraJ
HTH_7
PhyR_sigma2
Motif
Other DBs
NCBI-ProteinID:
ADY33282
UniProt:
F9ZAJ1
LinkDB
All DBs
Position
complement(2743829..2744389)
Genome browser
AA seq
186 aa
AA seq
DB search
MGSINEHIIRDFSVGQEKAFRILYEKYAPALRYFAAKYVEEGEVIDDIVQDVFVCLWEKR
VDFKTEETIKAFLYKAVKNSCLNTIRHQGVKDRYAEVALHEEELESFWDHILETELFELL
LGVFNELPPACREVYRLSLEGKKHEEIAEILQITVNTVKKHKNNANHYMRERLKHILSLL
VLCQFP
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
ttgggaagtataaacgaacatattatccgggatttttcggtaggacaggaaaaggctttt
cgtatattatatgaaaaatatgctcctgctttacgttattttgctgcgaaatatgtcgag
gagggagaggtgatcgacgatatcgtacaggatgtgtttgtttgtctatgggagaaaaga
gttgattttaaaacagaagaaacgatcaaagcttttttgtataaggctgtaaaaaatagt
tgtctgaatacgatccggcatcagggagtgaaagatcgttatgccgaagtggctctccac
gaagaagaactggaatctttttgggatcatatcctggaaaccgaattattcgaattatta
ttaggagttttcaatgaacttcctccggcttgccgggaggtataccgcctgagccttgaa
gggaaaaaacatgaagaaatagccgagatccttcagattaccgtaaataccgtcaaaaaa
cataagaataatgccaaccattatatgcgtgagcgcctgaaacatattctttccttactg
gttctttgtcaatttccttaa
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