Odoribacter splanchnicus: Odosp_2307
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Entry
Odosp_2307 CDS
T01428
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
osp
Odoribacter splanchnicus
Pathway
osp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Odosp_2307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_2307
03400 DNA repair and recombination proteins [BR:
osp03400
]
Odosp_2307
Enzymes [BR:
osp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Odosp_2307
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Odosp_2307
DNA repair and recombination proteins [BR:
osp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Odosp_2307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4249
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
ADY33303
UniProt:
F9ZAL2
LinkDB
All DBs
Position
complement(2768518..2769510)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVIMLESTDKFGKFEFRPLEPGYGITIGNPLRRILLSSLEGFAITGIKIH
GVEHEFATIPGVIEDVTEIILNLKQVRFKRKVEDVEDEKLTVLINGQEAFKAGDINKFLT
GFEVLNTELVICHMDPSVNFQMEITIQKGRGYVPSTENMPAEAEAGFIPIDAIYTPIRNV
KYEIENYRVEGKTDYEKLLFEIETDGSIAPTDALKEAAKILIHHFMLFSDEKISLESEDK
YGNEEFDEEVLHMRQLLKTKLVDMDLSVRALNCLKAAEVETLGELCRFNKNDLLKFRNFG
KKSLTELEALLENNNLEFGMDVTKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattagctttccagaaaccggacaaagtaatcatgctcgaatcgacagacaaa
ttcggaaaattcgaatttcgtccgttagagccaggttacggaatcacaattggtaatccg
ttacgcagaatcctactgtcttcattggaaggcttcgcgattaccggaatcaaaatacat
ggtgtagaacatgagtttgccaccatccccggggtgatcgaggatgttaccgagattatc
ctgaatctgaagcaggttcggttcaagagaaaagtggaagatgtagaggatgagaagctg
acggttctgatcaacggtcaggaagcttttaaggcaggggatatcaacaaattcctcaca
ggattcgaggtgctcaatactgaactcgtcatctgccatatggacccttctgttaatttc
cagatggaaattacgatccagaaagggcgcggttatgttcctagtacagaaaatatgccg
gcagaggccgaagcgggatttatccctattgatgccatttatactccgatccggaatgta
aaatatgaaattgagaactatcgtgtagaaggtaaaaccgactatgaaaagttgttgttt
gaaattgaaaccgatggctctatcgctcctaccgatgctttgaaagaggctgcgaaaatt
ctgattcatcactttatgttgttctcggatgaaaagatttctttggaatctgaagacaag
tacggtaatgaggaattcgacgaagaagtgcttcatatgcgtcagctgttgaagactaaa
ttagtcgatatggacttgtcagtgcgtgcattgaactgcctgaaagctgccgaagtagaa
acactcggggaattgtgccgcttcaataagaacgacctgttgaaattccgcaacttcggt
aagaagtcgctgaccgaactggaagctctgttggaaaataacaacctcgaattcggtatg
gatgttacaaagtataaattagataaggaataa
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