Odoribacter splanchnicus: Odosp_2354
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Entry
Odosp_2354 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_2354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_2354
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_2354
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
Sigma70_r2
HTH_36
HTH_17
HTH_24
Sigma70_ECF
HTH_23
Ocnus
DUF4843
HTH_40
HTH_11
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ADY33349
UniProt:
F9ZB33
LinkDB
All DBs
Position
complement(2805163..2806011)
Genome browser
AA seq
282 aa
AA seq
DB search
MKIRKKNRANYIYFDLPFQLDQYGRKTTERVDCLVYSFAIVDLMSKEVTVHRNVMGKCVV
AKGYDSVIFYIGEPSRINTLLISLKKLYLHVNQYSGKDNMLGYISEREFKLQFEDSFKRF
FKPLCFHAMSFVKDADIAKDIVHDVFLTTWAQRRKIDFTQPMLPYYLSLTRNRSLNYLDH
LKVRARHEENESYKNLLYAETDYSEHEELIRQIMNRINQLPDRCGEVMRLCFIECKKYKE
IAEILGVSVNTVKTHISLGLKILRKEFPASLLFAFFSLRRLR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatccgcaaaaagaatcgggcgaattatatatacttcgatctacccttccaattg
gatcaatatggaagaaaaacaactgaaagagtagattgcctggtatattcttttgcgatt
gtggatctgatgagcaaggaggtgaccgtccaccggaatgtgatgggaaaatgtgtcgtg
gctaaaggatacgattctgtgattttttatatcggggaaccttctagaataaatactttg
ttaatatccttaaaaaaattatatttgcacgtaaatcaatattccggcaaagataatatg
ttaggatatataagtgaacgtgagtttaagctacagtttgaagattcgtttaagcggttt
ttcaagccattgtgttttcatgcgatgagctttgtgaaggatgcggatattgccaaagat
attgtacatgatgtttttctgacaacatgggcgcaacgtagaaaaatagattttactcaa
ccgatgttgccttactatttgagtcttacccgtaaccgttcactgaactacctggatcat
ttgaaagtaagggcccggcacgaagagaatgaatcgtataaaaatctgctctatgccgag
accgattattccgaacatgaagaattgatccggcaaattatgaacaggatcaatcagctt
ccggatcgttgtggagaagtgatgcggctgtgttttatcgaatgtaaaaaatataaagaa
atcgctgaaatactgggtgtttccgtgaatactgtcaaaactcatatttcgttgggactc
aaaattcttagaaaagagtttcccgcttctctgttatttgcattcttttcgctcaggcgc
ctgagataa
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