Odoribacter splanchnicus: Odosp_2568
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Entry
Odosp_2568 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_2568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_2568
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_2568
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_VMAP-M9
HTH_28
KORA
HTH_30
HTH_SB
DegS
HTH_38
HTH_Tnp_ISL3
MRP-S31
Motif
Other DBs
NCBI-ProteinID:
ADY33550
UniProt:
F9Z3A1
LinkDB
All DBs
Position
3076174..3076746
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AA seq
190 aa
AA seq
DB search
MYPSASEILTAFTKNPDEGGKLLFERYYKPLVLFADSFLTDIHFSEDIVQDVFYDFIKHR
SYRQIAPEALTTYLFRCIRNTCLNRLRNRKLVMEAELLKFEAAEEEAMTISPELIAAIRE
TIKQLPDKTRQVIVSILIQGKKYKETAEELNVSVNTVKTLLNYGVKQLRKQFPDTLLLIF
YCIENDSLTL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgtccgcatctgaaattttaacggcttttacaaaaaatccggacgagggagga
aaattattattcgaacgatactataaaccgttagtattgtttgcagattcttttttgacg
gacattcatttttcggaagacatcgtacaggatgttttctatgatttcataaaacatcgt
tcctaccgccagatcgccccggaagctctcaccacttatctgttccggtgtatacggaat
acctgcctgaaccgtctgcgcaatcgcaagcttgttatggaagccgaattgttgaaattc
gaagctgcagaagaggaagcgatgactatatcgcccgaactgatcgctgcaatccgggaa
acgatcaaacaattacctgacaaaacacgccaagtgatcgtttctatcctgattcagggg
aaaaaatataaagaaacagccgaagaattaaatgtttctgtcaatacagtgaaaactcta
ctcaactacggcgtaaaacaattacggaaacaattccccgatacactcctgctaatattt
tattgcatcgaaaacgactccctgacgttataa
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