Odoribacter splanchnicus: Odosp_2971
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Entry
Odosp_2971 CDS
T01428
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
osp
Odoribacter splanchnicus
Pathway
osp03030
DNA replication
osp03430
Mismatch repair
osp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Odosp_2971
03430 Mismatch repair
Odosp_2971
03440 Homologous recombination
Odosp_2971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osp03032
]
Odosp_2971
03400 DNA repair and recombination proteins [BR:
osp03400
]
Odosp_2971
Enzymes [BR:
osp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Odosp_2971
DNA replication proteins [BR:
osp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Odosp_2971
DNA repair and recombination proteins [BR:
osp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Odosp_2971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ADY33939
UniProt:
F9Z6I2
LinkDB
All DBs
Position
complement(3535757..3539521)
Genome browser
AA seq
1254 aa
AA seq
DB search
MQFTHFHVHSQYSILDGAASIPGLIEKAKADGQTALALTDHGNMFGIKLFYDTCRQKGIK
PILGCEAYVARVSLYNKEKPIDRSGEHLIILAKNLTGYLNLVKLCSTAFCDGFYYRPRID
KTQLEKHHEGLIISSACLGGEIDQKIMAGDLEGAEKAALWYKNLFGEDYYLEVMRHPAAD
PKQRAEIYDNQQRCIQEKIKIARKLNIKLIATNDVHFLNEEDAEAHDLLICLNTRKDIDD
PTRMRYTRQEWFKTTQEMIDLFPDLPEAIENTQEITDKVEEYELDSDPLMPVFPIPPELG
TEEEYRQKFSQEDLFNEFTRDEKGNVVLTEEEANKKIKKLGGYDRLYRIKLEADYLKELT
MKGVVKRYGENPSPEIMERIIFELHIMKTMGFPGYFLIVQDFIRAARDMGVIVGPGRGSA
AGSAVAYCLGITNIDPIKYDLLFERFLNPDRISLPDIDVDFDDAGRQQVLEWVTEKYGAD
KVSHIVTFGSMAAKMAIKDVARVLKLELSEANRLAKMVPEAPKMTLKKAYKENPDLEKEK
QSLNPLISKTIQFAETLEGSIRQTGVHACGILISRDPLTDHIPIMPTEGESLMTTQYDGH
FVEPIGLIKMDFLGLRTLSIIKTCLDNIKKSKHIVLNENEIPLDDEETFKLFTRGDTTGL
FQFESPGMKKHLRALQPNRFEDLVAMNALYRPGPMEYIPSFIRRKHGEEPIEYDHPMMEP
YLKDTYGITVYQEQVMLQSRALGLFTRGQSDTLRKAMGKKKFELLAELKGKFVEGCKNNP
DFVQGAKEKGKDVEELVNKIWGDWEAFASYAFNKSHSVCYAYIAYQTGFLKAHYPAEFMA
ANLSNNLSDITKVTVFMDECKRMGLSVLAPDVNESYNDFTVNSHGQIRFGMAAIKGVGEA
AVEKIIEEREKNGPYKDVYDFFERIDYKSVNKKTIENLVTAGGLDSFGYHRAQYLHLVDA
TTTVLDNLVNYGQKNQQDSMNLQATLFGELDGFEVTKPNIPDCEPWHDYEKSKKEKELIG
IYLTSHPLDPYKLEMQLLCTPVEELNSGLETFKGKEINIAGIITAKREGKTKTGKDFGIL
TLEDFSGTYELAFFGKDYTDFRQYFIDETAIYVKGKVGPKWGKEGNELTFTIQKVGLLEA
LTENAIRSITLQVDIEKLTLETVTEIHELFTTDVNSESYKEAQQKAAEQRTQKNSDPENF
EEPVTAQNDIPLNFMLFDRQGNSVKMFSRTCKIRRSRELYEYFENNDSIKMKIN
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttacccactttcacgtccactcgcaatattctattctcgacggagcagccagt
attccaggcctgatcgaaaaagccaaagccgacggtcagaccgcactagcactgaccgac
cacggcaatatgttcgggataaagttgttttacgacacctgccggcaaaaagggatcaaa
cccattttagggtgtgaagcctatgtcgcacgggtatccttatataataaagaaaaaccg
atcgaccggtcgggggaacacctgattattctggccaaaaacctcaccggttacctcaat
ctcgtcaagctctgttcgacggctttttgcgacggtttctactaccgtccccgtatcgat
aaaacccagctcgaaaaacatcatgagggattgatcatttcctcggcttgcctgggagga
gaaatcgatcagaaaatcatggccggtgatctggaaggagctgaaaaagcagctctatgg
tacaaaaatctgttcggcgaagattattacctggaagtgatgcgccatccggcagcggat
cccaaacaaagagccgagatttacgacaatcagcaacgctgtattcaggagaaaatcaaa
atagccaggaaactgaatatcaaacttatcgccaccaacgacgtacattttctcaatgaa
gaagatgccgaagcccatgatctgctgatttgcctgaacacccggaaagacatcgacgat
ccgacccggatgcggtatacccgtcaggaatggtttaaaaccacccaggaaatgatcgac
cttttccctgatctgcccgaagccatcgaaaacactcaggagatcaccgataaagtcgag
gaatacgaactggactccgatcctttgatgcccgtttttcctattccccccgaactcggt
acggaagaagaataccggcaaaaattttcccaggaagacctcttcaacgaattcacccgc
gacgagaaaggaaatgtcgtactcaccgaagaagaagccaacaaaaaaatcaaaaaactg
ggcggatacgaccgtttatatcgtatcaaactggaagccgactatctgaaagagctgacc
atgaaaggggttgtgaaacgctatggtgaaaatccgtctcccgagatcatggaacgcatt
atcttcgagctgcatatcatgaagaccatgggtttcccgggttacttcctgatcgtgcag
gactttatccgggctgcccgggatatgggcgtaattgtaggaccgggacgtggatcggct
gccggtagtgccgtcgcctattgcctgggtatcacgaatatcgaccctataaaatatgat
ctgctgttcgagcgttttctgaatcccgaccgtatttccctgcccgatatcgatgtggat
ttcgatgatgcgggacggcaacaggtactggagtgggtaacggagaaatacggagccgac
aaagtgtcgcacatcgtaaccttcggcagtatggccgccaaaatggccattaaagacgta
gcccgggtattgaaactggaattatcggaagccaaccggctggctaaaatggttccggaa
gctccgaaaatgactctgaaaaaagcttataaggaaaacccggatctcgagaaagagaag
caatctcttaatccactgatttccaaaacaatacaatttgccgagaccctcgaaggttct
atccgtcaaaccggagtacatgcctgtggtatcctcatcagccgggatccgctcaccgat
catatcccgatcatgcctaccgaaggagaaagtctgatgactacccaatacgacgggcat
ttcgtggaaccgatcgggctgatcaaaatggactttctgggtttacgtaccctctcgatc
atcaagacttgtctcgacaatatcaaaaaatcgaaacatatcgtcctgaatgaaaacgaa
attcccctggacgacgaagaaaccttcaagcttttcacccgcggagataccaccgggctg
ttccagttcgagtcgcccggaatgaaaaaacacctccgcgccctccagcccaaccgtttc
gaggacctggtagccatgaacgccctgtatcgtccggggcctatggagtatatcccttcc
ttcatccggcgcaaacacggcgaagaacccattgaatacgaccatccgatgatggagccc
tacctgaaagacacttacggcattaccgtctaccaggaacaggtgatgctccaatcccgg
gccctgggactgttcacccggggacaatcggataccctccgtaaagctatgggtaaaaag
aagttcgaattgctggcggaattgaaaggcaaattcgtcgaaggttgtaaaaacaatccc
gattttgtccagggagccaaagaaaaaggaaaagatgtcgaagaactggtcaacaaaatc
tggggagactgggaggctttcgcttcttatgccttcaacaaatcgcattccgtttgttac
gcctacatcgcttatcaaaccggtttcctgaaagcccattatccggcagaattcatggca
gccaacttaagcaacaacctctcggacatcaccaaagtaacggttttcatggacgaatgt
aagcgaatggggttgagtgtactggcgccggatgtcaacgaatcttacaatgactttacc
gtaaactcacatggccagatccgtttcggaatggccgccatcaagggagtgggtgaagct
gccgtagaaaaaatcatcgaagaacgggagaaaaacggaccttataaagatgtatacgat
ttcttcgaacgaatcgactataaatcggtcaataagaaaacaatcgaaaacctggttact
gccggcggactggacagtttcggataccaccgggcccaatacctgcacctggtagacgca
acgaccacagtactggataacctggtgaactacggccagaaaaaccagcaggattccatg
aacctgcaagccaccctattcggcgaactggacggcttcgaagtcaccaaaccgaatatc
cccgactgcgaaccctggcacgactatgagaaatcgaaaaaagaaaaagagctgatcggt
atttacctgacctcccatcccctcgatccttataaactggaaatgcagttgctttgcacg
ccggtagaagaactcaacagcggccttgaaacttttaaaggcaaagaaatcaatatcgcc
ggtatcattaccgccaaacgggaaggtaaaaccaaaaccgggaaagacttcggtatcctg
accctggaggatttcagcggcacttacgaactggctttcttcggaaaagattataccgat
ttccggcaatactttatcgacgagacggcgatttatgtgaaagggaaagtagggcccaaa
tggggtaaagaaggaaacgagcttactttcaccattcaaaaagtgggcttattggaagca
ctgaccgaaaatgcaatccgttcgatcactttacaggtcgatattgaaaaactgaccctg
gaaacggtcactgaaatacacgagctctttacaaccgatgtgaacagcgagagttataaa
gaagcccagcagaaagcggccgaacaaaggacacagaagaacagcgatccggagaatttt
gaagaaccggtaacggcacaaaacgatattcctctgaatttcatgctgttcgaccgtcag
ggaaacagtgtcaaaatgttctcccgcacttgtaagatcaggcgttcccgggaattgtac
gaatatttcgaaaacaacgattcgatcaaaatgaagatcaactag
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