Odoribacter splanchnicus: Odosp_3107
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Entry
Odosp_3107 CDS
T01428
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
osp
Odoribacter splanchnicus
Pathway
osp03420
Nucleotide excision repair
osp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Odosp_3107
03430 Mismatch repair
Odosp_3107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osp03400
]
Odosp_3107
Enzymes [BR:
osp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Odosp_3107
DNA repair and recombination proteins [BR:
osp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Odosp_3107
MMR (mismatch excision repair)
Other MMR factors
Odosp_3107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADY34070
UniProt:
F9Z7Q4
LinkDB
All DBs
Position
complement(3683598..3685868)
Genome browser
AA seq
756 aa
AA seq
DB search
MNFINELNSSQQEAVINTEGPSLVIAGAGSGKTRVLTYRIAQLLSQGVPAYKILALTFTN
KAAREMQKRIAELVGQEIAANLWMGTFHSIFSKILRFEAEKLGYTSSYTIYDTQDSKNMI
KAIVKDMKLDDKIYKPSTILGRISMAKNNLIVAQSYAQSSRILSEDTAGKRPLLGEIYKQ
YQQRCKQSDTMDFDDLLLQTNILFRDFPDILAKYQQKFNYILVDEYQDTNYAQYLIVKKL
SDRHHNICVVGDDAQSIYSFRGARIENILNFKNDYPEYKLYKLEQNYRSTTTIVDAANCV
ISKNKEQIPKKTFSQNEEGEKIKVLRALSDKEEGFQVTNEIFRLANYEQQEYSDFAILYR
TNAQSRILEEALRKRNIPYKIYGGQSFYQRKEIKDLLAYFRLTVNQNDEEAFKRIINYPR
RGIGDSTVDKIREIAGKYHVSLWTVLCNLDKVAGAFNSGTLSKLQKFGSLIERFREQIAN
ENAYDAAVIIARSSGIIDDLSNDETPEGVSRKENIQELLNGIKDFSETAYKEGKDDKLPA
FLEGVALLTDQDGDKEGDQNKVTLMTIHASKGLEFSNVFITGLEEELFPAQQCVTTPAAL
EEERRLFYVALTRAEKRAFMSFATSRYKNGQVVSSRPSRFIGEIDQEFLEGYIAMREEPS
GFKLKTTTAMSGLHKPAITLNKPATIDIPAIDRSKLKPIDSNQVVPGMIIFHPTFGAGKV
VNLEGLGVQKKAKVVFREGGSRTLLLKFAKLYIQAD
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttatcaatgaattaaacagcagtcagcaggaggcggtcatcaacacagaaggt
ccttcattggtcattgcaggtgccggttcaggcaaaacacgtgtattgacctaccggata
gcccaattgctcagtcagggagtgccggcctataaaattctggccctgacctttaccaat
aaagctgcccgtgaaatgcaaaaacgaattgcagagttagtgggccaggaaatcgctgcc
aacctgtggatgggaactttccactcgattttttcaaaaatcctgcgattcgaagccgag
aaattaggctatacatcgagctataccatctacgatacccaggattctaaaaatatgatc
aaggccatcgtcaaagacatgaaactggacgataagatttacaaaccgagcacaatcctc
ggacggatttcgatggcgaaaaacaacctgatcgtcgctcagagttatgcccaatcttcc
cgcattttatccgaagatacagccggcaaacgcccgttattgggagaaatctacaaacaa
taccagcagcgttgcaaacaatcggataccatggatttcgacgatcttttgctgcaaacc
aatatcctgttccgtgatttcccggacattctggccaaatatcaacagaaattcaattat
atcctggtcgacgaatatcaggataccaattacgcccaatacctgatcgtaaaaaaactt
tcggaccggcatcataacatctgtgtagtcggggatgatgcacaaagtatttattctttc
cggggagcccggatcgagaacatccttaattttaaaaacgattatccggaatacaagcta
tacaaactggagcaaaattaccggtcgacgaccacgatcgtagatgcagcgaattgtgtg
atcagtaagaacaaagaacaaattcccaaaaagaccttttctcaaaacgaagaaggtgaa
aagatcaaggtattgcgggccttatccgataaggaagaaggtttccaggtcacgaatgaa
atcttccggctagccaattacgagcagcaggaatacagcgattttgctattctctaccgt
acgaatgcccagtcgcgtatcttagaagaagccctccgtaaacggaatattccttataaa
atttacggcggccaatctttctaccaacggaaagaaatcaaggatttgctggcttatttc
cggttgaccgtgaatcagaacgatgaagaagctttcaaacggatcatcaactatccccgt
cggggaatcggagattcgaccgtagacaaaatccgggaaatcgccgggaaatatcatgtc
agcctgtggaccgtactctgtaacctcgataaggtggccggcgctttcaacagcggtacc
ctttccaaattacagaaattcggtagtctgatcgaacgtttccgggaacagatagcgaat
gaaaatgcgtatgacgcagctgttatcatcgcccgttcttccggtatcatcgacgacctt
tccaatgacgaaacaccggagggcgtatcccggaaagaaaatatccaggagctcctgaac
ggtatcaaagatttcagtgaaaccgcctataaagaggggaaagacgataaattaccggcc
ttcctcgaaggagtagcgttgttgacagatcaggacggagataaagaaggggatcaaaac
aaagtgaccctcatgaccatccatgcatcgaaaggactggaattcagcaatgtatttatc
accggtctggaagaagaacttttcccggcccagcaatgtgtgaccactcctgccgccctg
gaagaagaacggcggcttttctatgtcgctctcacccgggcagaaaaacgggctttcatg
tcgttcgccacttcccgttacaaaaacggccaagtggtatcctcgcggccttcccgtttt
atcggtgagatcgatcaggaattcctcgaaggatatatcgcgatgcgggaagaaccctca
ggtttcaaattaaaaactacgacagctatgtccggtttacataagccggcgatcactttg
aataaacccgcaacaatagatattccggccatcgaccgatcgaaactcaaaccgatcgac
tccaatcaggtcgttcccggtatgatcattttccatcctaccttcggagccggaaaagtg
gtcaacctggaaggtttaggcgtacaaaaaaaggcaaaagtggtcttccgtgaaggggga
agccggactcttttgttaaaatttgcaaaattatacattcaagcagactaa
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