Odoribacter splanchnicus: Odosp_3260
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Entry
Odosp_3260 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_3260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_3260
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_3260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
DUF722
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADY34219
UniProt:
F9Z906
LinkDB
All DBs
Position
3875329..3875892
Genome browser
AA seq
187 aa
AA seq
DB search
MEDEILIKYLRKNDRKAYSILFDKYFERLFTFAVRVVFREDVANDIVQEIFISLYEKSEI
LNYDLSLKSYLFNSVRNRCFNYLRDRKVEDRRMNLYAEACLWSDNVDWIEEEEVLRKIQE
VMLELPEKCREVCRRRFFEGKKFEEIAEELDISESTARVQTHRGMEMLRQRFAEYDLAVI
LFFTPFL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtggaagatgaaattttaataaaatatttacgcaagaacgaccggaaagcttattcgata
ttgttcgataagtatttcgagcggctctttacctttgctgtccgcgttgtgtttcgggag
gatgtggctaatgatattgtgcaggaaatttttatcagtctgtatgaaaaatcggaaatc
ctgaattacgacctttctttaaagtcgtatctttttaatagtgtgcggaatcgttgtttt
aattatttgcgggatcgtaaggtggaagaccggcgtatgaatttatatgcggaagcttgt
ctatggtcggataatgtcgattggatagaggaagaagaagtgttgcggaaaattcaggag
gtgatgctggagttacccgagaaatgccgggaggtgtgtcggcggcgtttttttgaaggg
aaaaaatttgaggaaatagccgaagaactcgatatttccgaaagtactgcgagggtacaa
actcaccggggtatggagatgttgaggcagcgttttgcggaatatgatctggccgttatt
cttttttttactccttttctttaa
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