Oceaniradius stylonematis: ABWH87_02195
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Entry
ABWH87_02195 CDS
T10754
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ost Oceaniradius stylonematis
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ost03016
]
ABWH87_02195 (truB)
Enzymes [BR:
ost01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABWH87_02195 (truB)
Transfer RNA biogenesis [BR:
ost03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABWH87_02195 (truB)
Prokaryotic type
ABWH87_02195 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XHC16134
LinkDB
All DBs
Position
455973..456911
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AA seq
312 aa
AA seq
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MARQRTKKGRPVSGWLVLDKPLELGSTKAVSKVKWLFGAQKAGHAGTLDPLATGILPIAL
GEATKTVPYVMDGTKAYRFTVSWGAQTTTDDLEGEATETSDMRPDRAAIEALLPRFTGTI
SQTPPQFSAVKVDGERAYALARQGEAAAVTARDVEIDALTIIAHDGDTTIFKVECGKGTY
VRSLARDMGRELGCFGHVSALRRTFVEPFDEADAVTLAELEAAVEAAGDDEAARHGALDA
FLLDTGEAMDGFPRVDLGDEQAHRIRLGNPAILRGRDAPVAEEEACAFHRGRLVAIGEIA
QGAFRPRRVFRL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccagcgcacgaagaagggccggccggtttccggctggctggtgctcgacaag
ccgcttgagctgggttcgaccaaggcggtctccaaggtgaaatggctgttcggcgcgcaa
aaggccggccatgccggaacgctcgatccgctggcgaccggcatcctgccgattgcgttg
ggtgaagcgaccaagactgttccctacgtgatggatggcacaaaggcttaccgtttcacc
gtgagctggggcgcacagacgacgactgacgatctggaaggcgaggcgaccgaaacgtcc
gatatgcggccggaccgcgccgccatcgaggcgcttctgccacgcttcaccggcacgatc
agccagacgccgccgcaattctccgccgtcaaggtcgatggcgagcgcgcctatgcgctg
gcccgtcagggcgaggcggcggcggtgacggcacgcgatgtcgagatcgacgcgctcacc
atcatcgcccatgacggcgacacgaccattttcaaagtcgaatgcggcaagggcacctat
gtccgctcgctcgcccgcgacatgggacgggagcttggctgtttcggccatgtcagcgcg
ttgcgccgaaccttcgtcgaaccgttcgacgaggcagacgccgtcacccttgccgaactg
gaagccgcggtcgaggccgccggcgacgacgaagcggcgcgccatggggcgctcgatgcg
ttcctgctcgacacgggcgaggcgatggacgggtttccgcgtgtcgatctgggcgacgag
caggcgcaccgcatccgtcttggcaacccggcgatcctgcgcggccgcgacgcgccggtc
gccgaggaagaggcctgcgccttccatcgcgggcgcctggtggcgatcggcgagatcgcg
cagggcgccttccgcccgcgccgcgtcttccgcctttga
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