Oceaniradius stylonematis: ABWH87_02865
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Entry
ABWH87_02865 CDS
T10754
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ost Oceaniradius stylonematis
Pathway
ost02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABWH87_02865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ost02000
]
ABWH87_02865
Transporters [BR:
ost02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABWH87_02865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Mmc1_C
Motif
Other DBs
NCBI-ProteinID:
XHC16257
LinkDB
All DBs
Position
592392..593459
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AA seq
355 aa
AA seq
DB search
MKHILKQSISGAAGMALLAVCGGAVGTASAEESLTIVSWGGVVSEAHRKSFWDPFTEESG
IKILDNSFNGELSNIRAQVESGTILWDIAEPEFAEAALGCEEGLFEPLDTSIIDVDDIPA
AHVTRCSVTSLLASTVLAYNAAEFEGEGPRSWVDFWDVDRFPGRRGLNFSVTDTLIVALL
ADGVAVDEVYEVLETKDGQDRAFAKLDELRDHIIWWRSGTEQIQGLLSGEYVMAAAWNGR
VASAAKTEGADLAMAWEAGHILTGNQWVVLKGSKHKAAAMGFLAFALRPEQQADFMNGID
YGVISRKAHELISPERLAIMPGNPALEDDAVPPNANFWLNNFDTLNERFLAWASR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatatcttgaaacagagtatcagcggggccgcaggcatggcccttctcgcggta
tgcggcggtgctgtcggcaccgcgtccgcggaagagagcctgacgatcgtgtcatggggc
ggcgttgtttccgaggcgcacaggaaatccttctgggacccgttcacggaagagagcggc
atcaagatcctggacaactccttcaacggcgaactgagcaacatccgtgcccaggtcgaa
agcggcaccatcctttgggacatcgccgagccggaattcgcggaagcggcgctgggttgc
gaggaggggcttttcgaaccgctcgataccagcatcatcgacgttgacgacatcccggct
gcgcatgtcacccgctgttccgtcacgtcccttctcgcctcgacggtgcttgcctacaac
gcggccgaattcgaaggcgagggtccgcgaagctgggtggatttctgggatgtcgaccgc
tttcccggacgtcgcgggctcaacttttcggtcaccgacacgctcatcgtcgcgctcctc
gccgacggtgtggcggtggatgaggtctatgaggttctggaaaccaaggacggacaggac
cgtgccttcgcaaaactcgatgaactgcgcgatcacatcatctggtggcgttcgggcacg
gaacagatccagggtctcctttcgggcgagtatgtgatggctgcggcctggaacggtcgc
gtggcaagcgcggcgaagaccgagggcgcggatctcgccatggcctgggaagccggtcat
atcttgaccggaaaccagtgggtggtcctcaaggggagcaagcacaaggcggctgcgatg
ggcttcctggctttcgcgctgcgtcccgaacaacaggccgatttcatgaacggcatcgac
tacggcgtcatcagccgcaaggcacatgaactgatctcgccggaacggctcgcgatcatg
ccgggaaaccccgctcttgaagacgatgcggtgccgccgaacgcgaatttctggctcaac
aacttcgacacgctcaacgagcggttcctcgcctgggcctcgagatga
DBGET
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