Oceaniradius stylonematis: ABWH87_06015
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Entry
ABWH87_06015 CDS
T10754
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ost Oceaniradius stylonematis
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ost03032
]
ABWH87_06015
03036 Chromosome and associated proteins [BR:
ost03036
]
ABWH87_06015
03400 DNA repair and recombination proteins [BR:
ost03400
]
ABWH87_06015
DNA replication proteins [BR:
ost03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABWH87_06015
Chromosome and associated proteins [BR:
ost03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ABWH87_06015
DNA repair and recombination proteins [BR:
ost03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ABWH87_06015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF937
Motif
Other DBs
NCBI-ProteinID:
XHC16841
LinkDB
All DBs
Position
1223428..1223748
Genome browser
AA seq
106 aa
AA seq
DB search
MNKQELIDQVAASTGLSKAEATAAVDAVFATIAQEMASGDTVRVPGFGNFGVADRAARQG
RNPATGEPVAIPARRLPKFGPARTLKDAVNDENTGIMSVGKGTTPP
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaagaattgatcgatcaggttgccgcaagcacgggtctttccaaggctgaa
gcaacggccgccgtcgatgccgttttcgcaaccatcgcgcaggagatggccagcggcgac
accgtgcgggttcccggtttcggcaatttcggcgtggcggaccgcgctgcccgtcagggg
cgcaatccggcgaccggagagccggtggccatcccggccaggcgcctgccgaagttcggg
ccggccaggacgctcaaggatgcggtgaacgacgaaaacaccggcatcatgtcggtcggc
aagggcaccacgcctccctga
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integrated database retrieval system
