Oceaniradius stylonematis: ABWH87_07255
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Entry
ABWH87_07255 CDS
T10754
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ost Oceaniradius stylonematis
Pathway
ost03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABWH87_07255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ost03021
]
ABWH87_07255
03400 DNA repair and recombination proteins [BR:
ost03400
]
ABWH87_07255
Enzymes [BR:
ost01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABWH87_07255
Transcription machinery [BR:
ost03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABWH87_07255
DNA repair and recombination proteins [BR:
ost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABWH87_07255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
XHC17065
LinkDB
All DBs
Position
1460229..1461236
Genome browser
AA seq
335 aa
AA seq
DB search
MIQKNWQELIKPNKVEFKGSGNKISLVVEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQ
IDGVLHEFSSIAGVREDVTDIILNIKEIAIRMEGDGPKRMVVRKQGPGTVIAGDIQTVGD
VEVLNPDHVLCTLDEGAEIRMEFTVDAGKGYVPADRNRAEDAPIGLIPVDSLYSPVRKVS
YKVENTREGQVLDYDKLTMNVETDGTLSGEDAVAYAARILQDQLGVFVNFEEPEREAAEE
QVQELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEGEMLRTPNFGRKSLNE
IKEVLASMGLHLGMEVAAWPPENIEDLAKRYEDHY
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgatacagaagaattggcaggaactgatcaagccgaacaaggtcgagttcaagggctcg
ggcaacaagatttcgctcgtggtcgagccgctcgagcgcggctttggcctgacgctcggc
aacgcgctgcgccgcgtgctgctgtcgtcgctgcgcggtgccgccgtgaccgccgtgcag
atcgacggtgtcctgcatgagttctcgtcgattgccggtgtgcgcgaagacgtcaccgac
atcatcctgaacatcaaggaaatcgccatccgtatggaaggcgacggccccaagcgcatg
gtcgtgcgcaagcagggtccgggcaccgtgatcgccggcgatatccagacggtcggcgat
gtcgaggtgctgaaccccgaccacgtgctgtgcacgctggacgagggcgccgaaatccgc
atggaattcaccgtcgatgccggcaagggctatgtgcccgcagaccgcaaccgcgccgaa
gacgcgccgatcggcctgatcccggtcgacagcctctattcgccggttcgcaaggtttcc
tacaaggtcgagaacacccgcgagggccaggttctggactatgacaagctgaccatgaac
gtcgagacggacggcacgctgtcgggcgaggacgcggtggcttatgccgcgcgcatcctg
caggaccagctcggcgtcttcgtcaatttcgaggagcccgagcgcgaggccgccgaggaa
caggtgcaggagctggcgttcaacccggcactgctcaagaaggtcgacgaactggaactg
tcggtgcgttcggccaactgcctgaagaacgacaacatcgtctatatcggcgacctgatc
cagaagaccgaaggcgaaatgctgcgcacgccgaacttcggccgcaagtcactcaacgag
atcaaggaagtgctcgcatccatgggcctgcatctgggcatggaagtggccgcatggccg
cccgagaacatcgaagatctcgccaaacgctacgaagaccattactaa
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