Oceaniradius stylonematis: ABWH87_07320
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Entry
ABWH87_07320 CDS
T10754
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ost Oceaniradius stylonematis
Pathway
ost02020
Two-component system
ost02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABWH87_07320
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABWH87_07320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ost03000
]
ABWH87_07320
Transcription factors [BR:
ost03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
ABWH87_07320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR
HVO_A0261_N
Crp
MarR_2
HTH_11
HTH_20
GntR
Rrf2
HTH_24
HVO_A0114
HTH_CodY
HTH_36
Motif
Other DBs
NCBI-ProteinID:
XHC17075
LinkDB
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Position
complement(1471774..1472463)
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AA seq
229 aa
AA seq
DB search
MQQLSAFALFSALDADADSRFAGQCSISDFDENELVLDFDDDTHDVFLIASGRVRVILRI
ATGREVILGELGEGAFFGELAAIDGTRRSANITAMVRTRLIRVPQSVFRTILREEPDVAL
ALMSAMSDRIRGLNTRLAEHSFLAAKYRLYSELIRLSKPRKGHDGQRTITPPPVQQDLAE
RIGCRREVVSREIAKLEREGVIERTRGAIVLADMGELNRRLSEGWEKGG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagctttccgcctttgcgctgttttcggcgctcgatgcagacgccgacagccgc
tttgccggccagtgctcgatcagcgatttcgacgagaacgagctggtgctcgatttcgac
gacgatacccatgacgtgttcctgattgccagcggtcgcgtacgcgtcatcctgcgcatt
gcgacgggccgcgaggtgatccttggggaacttggcgaaggcgcgtttttcggcgagctg
gcggccatcgacggcacgcgccggtccgccaacatcacggcgatggtgcgcacgcggctt
atccgcgtcccgcaatcggtgttccgcacgatcctgcgcgaggagcccgatgtggcgctt
gccttgatgagcgccatgtcggaccgcattcgcgggctcaatacgcggctggccgagcat
tcgttccttgccgccaagtaccggctctattcggagctgatccgcctgtcgaaaccgcgc
aagggccatgacggccagcgcacgatcacgccgccgccggtgcagcaggatctggccgaa
cggatcggctgtcggcgcgaggtggtcagccgcgagatcgcgaaactcgaacgggagggc
gtgatcgaacgcacgcgcggggcgatcgtgctcgccgacatgggcgaactcaaccgccgt
ctcagtgaaggctgggaaaagggcggctga
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