Oceaniradius stylonematis: ABWH87_08205
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Entry
ABWH87_08205 CDS
T10754
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
ost Oceaniradius stylonematis
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ost03036
]
ABWH87_08205
Chromosome and associated proteins [BR:
ost03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
ABWH87_08205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
DEAD
Motif
Other DBs
NCBI-ProteinID:
XHC17234
LinkDB
All DBs
Position
complement(1631533..1635855)
Genome browser
AA seq
1440 aa
AA seq
DB search
MNMVSPVADPAAPLAVAPVILAASNLLLPHLERGQRVDAVTLRGAMEAAFGASDAAGAWT
WKTAYDACEAAIVLFLRKYGKPLFRKAGSPAAILPQLGKIAGLLPTHTRRSEEAQTFQQY
STPIPLGLAATTAAAITPADRVLEPSAGTGLLAILAEIAGGTLMLNELAEARAGLLSSLF
PALAVTRFDAAQIDDHLDPGLIPTVVLMNPPFSVMANVEGRMADATFRHVASALARLAPG
GRLVTITGASFAPDNPAWTVAWTRLQERGRVVFSAAVDGSVYAKHGTTIPTRLTVIDKLP
AEEAAMFPPAPGIAPDVATLLGWLTDQLPGRLPVDPGVAMPVARPVAPRTVRGYVNRAAR
AAPAALPAEPEAVPLAYETVDWKPAENDRLSDAIYEEYRLQTIRIAGAQAHPTQLVQSAS
MASIAPPKPSYRPTLPKDILGRLSDAQLETVIYAGEAHSGFLAGTWTVDDTLDSLSVTPE
DANGAIRFRQGFMIGDGTGVGKGRESAAIILDNWMQGRRKAVWISKSDKLIEDAQRDWSA
LGMERLLVTPLSRFPQGSKITLNEGILFLTYATLRSDDRGERVSRVKQIVEWLGSDFDGV
VIFDEAHSMQNAAGGKGERGDVAASQQGRAGLRLQHALPDARVVYVSATGATTVHNLAYA
QRLGLWGSEDFPFSTRAEFVEAIEAGGVAAMEVLARDLRALGLYTARSLSFSGVEYELVE
HNLTPEQVRIYDSYADAFAIIHNNLDAAMEAANITGSSGTLNRQAKSAARSAFESAKQRF
FGHLLTSMKTPTLIRSITSDLEAGHSAVIQIVSTGEALMERRLAEIPTEEWGDLKMDLSP
REYVLDYLAHSFPVQLYEPFTDSEGNLSSRPVYRDGQPVDSREAVARRDEMIASLASLPP
VPGALDQIIQHFGTDTVAEVTGRTRRIVRKSGNDVSIDRLAVENRAGSANLAETQAFMDD
QKRVLVFSDAGGTGRSYHAELSARNTRLRVHYLLEAGWKADAAIQGLGRTHRTNQKQPPL
FRPISTNVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHYARDALRQLY
LLLVRGKVEGCSLERFEAATGLKLTDSNGIKDELPAITTFLNRLLALTIELQGVLFTAFE
QLLTARIEGAIASGTYDAGLETLRAESFVVTDRRVIYTHPRTGAETSLLTLTERKRNRPV
TLDAALAELDDPRAKLLINERSGRAAVQIPTTSVMLDDGEIERRVRLVRPMDAHNVPVRM
MGETRWTEAGREVFAAAWNNEVAEVPEFADSTLHMVTGLLLPIWKRLPQEFTRVYRLQTD
AGERIIGRKVSPAWAANATTTGIATITPDDAFAALMDGRAILDLAEGLQLRRVRVMGANR
IELSGFTDTMRQRLTAYGLFHEIISWKLRMFVPVDASGLAVLARLLDRWPVERIGEREAA
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggtttcccccgtggccgatccggccgcgccgcttgccgttgcgccggtgatc
cttgccgcctctaatctcctgcttccccatcttgaacgcggccagcgcgtcgatgccgtc
acgctgcgcggcgcaatggaagccgccttcggcgcatccgatgccgccggcgcgtggacc
tggaagaccgcctacgacgcctgcgaggctgcgatcgttctgttcctgcgcaaatacgga
aagccgcttttccgcaaggccgggtctcctgcggccattctgccgcagctcggaaagatc
gccgggcttctaccgacgcatacacgccggtcggaggaagcgcagacctttcagcagtat
tcgaccccgatcccgctcggcctcgcggccacaacggcggcggcgatcacccccgccgac
cgggttcttgagccttcggccgggaccgggctcctcgccatcctggccgagatcgccggc
ggcacgcttatgctcaacgaactcgccgaggcccgtgccggcctcttgtcttccctcttt
ccggcccttgccgtcacccggttcgatgccgcccagatcgacgatcacctcgatcccggc
ctgatcccgaccgtggtgctgatgaacccgccattctctgtcatggcgaatgtcgagggt
cgcatggccgatgccaccttccgccatgtcgcctcggcgctggcgcgcctcgcccccggc
gggcggctcgtgaccatcaccggcgcaagcttcgcgcccgacaatccggcctggacggta
gcctggacccggctgcaggagcgcggccgcgtcgtcttctccgccgccgtcgacggctcg
gtctatgccaagcatggcacgacgatcccgacgcggctcaccgtcatcgacaagctaccc
gccgaagaagcggcgatgtttccacccgccccaggcatcgcgccggatgtggcgacactt
ctgggctggctgacggatcaactgcctggccggctgccggtcgatcccggcgtagccatg
ccggtcgcacggcctgtcgcaccccgcaccgtgcggggctatgtcaaccgtgcagcccgc
gccgcgcctgccgcgctgccggccgaaccggaggccgtgccgctcgcttacgagaccgtg
gactggaaaccggccgagaacgaccgcctttccgacgcgatctatgaggaatacaggctt
cagaccatccgcatcgccggggcgcaggcgcatccgacccagctcgtgcaatccgcctcg
atggcgagcatcgcaccgccgaagccgagctatcggccgacgctgccgaaagacatcctc
ggcaggctgtccgacgcgcagctggagacggtgatctatgccggcgaagcccattcgggt
ttccttgccgggacctggacggtcgatgacacgctcgacagcttgtccgtcacgccggag
gatgccaacggcgccatccgtttccggcagggcttcatgatcggcgacggcaccggcgtc
ggcaaaggccgggaatccgctgcaatcattctcgacaactggatgcaagggcgccgcaag
gcggtctggatcagcaaatcggacaagttgatcgaggatgcgcagcgcgactggtcggcc
ctcggcatggagcggctgctggtcacgcctctcagccgcttcccccaaggttcaaagatc
acgctgaacgaaggtatcctatttttaacctatgccacgctgcgctccgacgaccgtgga
gaaagggtttccagggtcaaacagatcgtcgaatggttgggctccgatttcgatggagtg
gtgattttcgacgaggcccacagcatgcagaacgccgcaggtggcaagggagaacgcggc
gatgttgccgccagccagcagggccgcgccgggctgcgcctccagcatgccctgccggat
gcgcgggtggtctatgtctcggccaccggcgcgaccacggtgcacaatctcgcctatgcc
cagcggctcggtctctggggcagcgaggacttcccgttctcgaccagggccgagttcgtc
gaggcaatcgaggcgggtggcgtcgcggcgatggaagtgctggcgcgcgatctgcgtgcc
cttggtctttacactgcccgctcgctctccttttcgggcgtcgaatacgaactggtcgag
cacaatctgacgcccgagcaggtccgtatctacgacagctatgcagatgccttcgccatc
attcataacaatctcgacgccgcaatggaggcggcaaacatcaccggcagttccggcacg
ctgaaccggcaggcgaaatccgccgcgcgctccgcctttgagtccgccaagcagcgcttc
ttcggccatctgctcaccagcatgaaaaccccgacactgatccgctcgatcaccagcgat
ctggaggcgggccattcggctgtcatccagatcgtttcgaccggcgaggcactgatggaa
cggcggctggcggagatccccaccgaggaatggggcgatctgaaaatggatttgtcgccc
cgcgaatatgtcctggactaccttgcccattccttcccggtgcagctctacgagcccttc
accgacagcgagggcaacctgtcctcgcgccccgtctatcgcgacggccagccggtcgac
agccgcgaggccgtggcgcggcgcgacgagatgatcgccagtctcgccagcctgccgccg
gtgcccggcgcgctcgaccaaatcatccagcatttcgggaccgacaccgtggccgaggta
acggggcgcacgcgccggatcgtccgcaaatccggcaacgacgtctcgatcgaccgcctc
gcagtggaaaaccgtgcgggttcggccaatctggccgagacccaggcgttcatggacgat
cagaagcgtgtgctggtgttcagcgatgccggtggcaccggccgcagctatcacgccgag
ctttcggccaggaacacccggctgcgtgtccattacctgctcgaggcgggctggaaggcg
gacgctgccattcagggcctcggccggacgcaccggaccaaccagaagcagccgccgctc
ttccgcccgatctcgaccaatgtgaaggccgaaaagcgctttctctcgaccatcgcccgc
cgcctcgacacgctgggcgcgataacgcgcggccagcgccagaccggcggtcagggcctg
tttcgccccgaggacaatctggaatcgcactatgcccgcgatgcgctgcgccagctttat
ctcctgctcgtgcgcggcaaggtcgagggctgttcgctggagcggttcgaggccgccaca
ggcctgaagctgacggactcgaacggcatcaaggacgaactgcccgccatcacgacgttc
ctcaatcggctgctggcattgaccatcgagcttcagggcgtcctgttcaccgccttcgaa
cagcttctgaccgcccgcatcgagggtgccattgcgtccggcacctatgacgccgggttg
gagacgctgcgcgccgaaagcttcgtcgtcaccgaccggcgggtgatctacacccatccc
cgcaccggggcggagaccagcctgctgacgctcaccgagcgcaagcgcaaccggccggta
acgctcgatgccgccctggccgaactagacgatccgcgcgcaaagctcctgatcaacgag
cgttcgggccgggcggcggttcagatccccaccaccagcgtcatgttggacgatggcgag
attgagcgccgcgtccgcctggtccggccgatggacgcgcacaatgtcccggtcaggatg
atgggcgagacccgttggactgaagccggtcgggaggtcttcgcagcggcgtggaataac
gaggtcgcagaggtgccggagtttgccgatagcaccttgcatatggtcacgggcctgctg
ctgccgatctggaagcggttgccgcaggagttcacccgcgtctatcgcctccagaccgat
gcgggcgagcgcatcatcggccgcaaggtctcgccggcctgggccgcaaatgcgacgacg
accggcatcgcaacgatcacgccggacgatgccttcgcggcgctgatggacgggcgggcg
atcctcgatctcgccgagggtctccagcttcgccgggtccgcgtcatgggggcgaaccgg
atcgaactctcgggcttcaccgacacaatgcgccagcggctgacggcctatggcctattc
cacgagatcatctcctggaagctgcgcatgttcgtaccggtcgatgccagcggcctggcc
gtgctcgccagactgctagaccgctggccggtcgaacgcataggcgagcgggaggcggcc
tga
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