Oceaniradius stylonematis: ABWH87_10415
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Entry
ABWH87_10415 CDS
T10754
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ost Oceaniradius stylonematis
Pathway
ost02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABWH87_10415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ost02000
]
ABWH87_10415
Transporters [BR:
ost02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABWH87_10415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
XHC17483
LinkDB
All DBs
Position
complement(2088441..2089520)
Genome browser
AA seq
359 aa
AA seq
DB search
MFNKAMRRRTVLGGAAAMAGTLAMPSILRAQDRSLKVGVYGGYFKDSFDANIFPVFTEET
GIAVESIAEPTGEAWLVQLEQAARAGQAPADVSMMAQTPTRRGMTTDLWAPLDPSRISNF
DDLLPTFVAEYPDGRLAGVGAVAWYITLVTNTDTYPEAPESWMALWDEANADKLGLLALV
SNSFLLEVTAKTHMGGTDALDTEEGQLAAFEKLAEVKPNVRLWYRDEAQFEQALKSGEIP
MGQYYHDVTGLAAADGHPVRSTFPKEGGILDSGNWCLSRASDKSDEAHVFIDFMSRPETQ
GLLSRKVGTAPTLARGVLDLTDEEFSAVSSEIDPIVPRYDLYTEKGDWLNQKWTELIVG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaacaaggcgatgcgccggcgcacggtgcttggcggcgcggcggcgatggccggc
acgttggccatgccgtccatcctgcgggcccaggaccgctcgctgaaggtcggcgtctat
ggcggctacttcaaggattcgttcgacgccaacatcttcccggtcttcaccgaagagacc
ggcattgccgttgaatcgatcgccgagccgaccggcgaggcctggctggtgcagctcgag
caggcggcccgtgccggccaggctccggccgacgtgtcgatgatggcacagacgccgacc
cgccgcggcatgaccaccgatctttgggcgccgctggacccgtcacgcatttccaatttc
gacgatcttctgccgaccttcgtcgccgaatatcccgatggacggctggccggggtcggc
gccgttgcctggtacatcacgctggtcaccaacaccgacacctatcccgaggcgccggaa
agctggatggcgctgtgggacgaggccaatgcggacaagcttggccttcttgcgctggtc
tcgaactcgttcctgctcgaggtgacggccaagacgcatatgggcggaaccgatgcgctc
gacaccgaagagggccagttggccgcgttcgaaaagctcgccgaggtcaagccgaacgtg
cggttgtggtaccgcgacgaggcgcagttcgagcaggcgctgaaatcgggcgagatcccg
atggggcagtactaccatgatgtgacgggccttgcggccgccgatggccatccggtgcgg
tcgaccttccccaaggagggcggcattctggattcgggcaattggtgcctgtcgcgcgcg
tccgacaagtcggacgaagcccatgtcttcatcgacttcatgagccggccggaaacccag
ggtctgctgtcgcgcaaggtgggcaccgcgccgacgcttgcacgcggcgtgctcgacctg
accgacgaggagttctcggccgtgtcgtccgagatcgatccgatcgtgccgcgctacgat
ctttacacggagaagggcgactggctgaaccagaaatggaccgagctgatcgtcggctga
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