Oceaniradius stylonematis: ABWH87_11345
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Entry
ABWH87_11345 CDS
T10754
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ost Oceaniradius stylonematis
Pathway
ost03030
DNA replication
ost03430
Mismatch repair
ost03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWH87_11345
03430 Mismatch repair
ABWH87_11345
03440 Homologous recombination
ABWH87_11345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ost03032
]
ABWH87_11345
03400 DNA repair and recombination proteins [BR:
ost03400
]
ABWH87_11345
Enzymes [BR:
ost01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWH87_11345
DNA replication proteins [BR:
ost03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABWH87_11345
DNA repair and recombination proteins [BR:
ost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABWH87_11345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS_8
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-ProteinID:
XHC14490
LinkDB
All DBs
Position
2280588..2282687
Genome browser
AA seq
699 aa
AA seq
DB search
MHWVERLSLRARIALFFALIGAVSVALLVAAIVWLSIRLGAEAADHIVLIVGGSAFAIAG
LIAWVALKFDENLAKPLMAIAADLKTIAHSDGKAMKLDSEGEYLGMIAPAAREVSSALIE
ARERTDAAIETAMRDAARQKAALEALLRDLHQGLVVCTMTGRVTLYNHRAVEILHVEEFR
RDDPASTDVMIGSLGLGRDFFNIVDAAPFSAALSAFEAPADPSNPLPIEGLGSFPIVFST
CDGAVTMRGQVALRLNEAGNAPAGFITVFDDITTELAAGLERDRVLREAIDGIRTAIDDS
GETPASAPLTTALKRLELASNNIIASAWPMADVAAGRLFGAVRKTLSGSAVAVETAGNGE
LIHADSATLIALLRNLADGLAERGDVEKLALKASGLGHARQIAITVTGAPPGAAWLEARL
SENADAGTAFLSGRSILERHCATATVKGDTILIDFPVNTGARGTTGKDTAPVLDARPEFY
DFDLFERDTSKDLLDVPLSELHAVVFDCEMTGLDPRRGDEIVSIAGARVVNGRVLSGEIF
DLFVNPGRTIPAASTNIHHITDAMVADAPLIPSALKRFHAFAKDQVLVAHNAAFDMAFLA
KGEKAAGVKFDNVVLDTVLLAAHLQGAESELSLDGLAERFNVEIAEHDRHTARGDAIATA
HVFVKLIRLLEASGVVTLGDALRVSEDQTAIRRRQAAYG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcactgggtggagcgcctcagcctgcgcgcccgcattgccctgttctttgcgctgatc
ggtgcggtcagcgtggcgctgctggtcgccgcgatcgtctggctgtcgatccgccttggc
gccgaggcggccgaccatatcgtgctgatcgtcggcggttccgcctttgccatcgccggt
ctgatcgcctgggtggcgctcaagttcgacgagaacctcgccaagccgctgatggccatc
gccgccgatctcaagaccatagcccacagcgacggcaaggcgatgaagctcgacagcgag
ggcgaatatctgggcatgatcgcgcccgccgcgcgcgaagtgtcgagcgcgctgatcgag
gcgcgcgagcgcaccgatgcagccatcgaaaccgcgatgcgcgacgccgcgcgccagaag
gcggcgctggaggcgctgttgcgcgacctgcatcagggccttgtcgtgtgcaccatgacc
ggccgcgtcacgctctacaatcatcgcgccgtcgaaatcctccatgtcgaggaattccgg
cgtgacgaccccgcctcgaccgacgtgatgatcgggtcgctcggccttggccgcgatttc
ttcaacattgtcgatgcggcgccattcagcgcagcgctcagcgccttcgaggcgccggcc
gacccgtccaacccgctgccgatcgaggggctcggatcgttcccgatcgtcttttcgacc
tgcgacggcgccgtgacgatgcgcggccaggtcgcgctgcgcctcaacgaggcgggcaac
gcgccggccggcttcatcaccgtcttcgacgatatcaccaccgaactggccgcaggcctc
gaacgcgaccgggtactgcgcgaggcgatcgacggcatccgcacggcgatcgatgacagc
ggcgaaacgccggcatctgcaccgttgaccacagcgctcaagcgcctcgaactggcatcg
aacaacatcatcgcctcggcctggccgatggccgatgtggctgcaggccggctgttcggc
gccgtgcgcaagacactttcaggaagcgccgtcgccgtcgaaaccgccggaaatggcgaa
ctcatccatgccgacagcgccacgctgatcgccctgctgcgcaacctcgccgacgggctg
gccgaacgcggcgatgtcgaaaaactcgctctgaaggcgagcggcttgggccatgcgcgg
cagatcgccatcaccgtgaccggcgcgccgcccggcgcggcatggctggaggcgcgcctg
tcggaaaacgccgatgccggcaccgccttcctgtcgggccgctcgatcctcgaacgccat
tgcgcgacggcgaccgtgaagggcgataccatcctgatcgatttccccgtcaataccggc
gcacgcggaacgaccggcaaggacaccgcgccggtgctcgatgcgcggcccgaattttac
gatttcgacctgttcgagcgcgacacgtccaaagacctgctcgacgtgcccctcagcgaa
ctgcatgccgtggtcttcgactgcgagatgaccgggctcgatccgcgccgcggcgacgag
atcgtctcgatcgccggcgcgcgcgtggtcaacgggcgggtgttgagcggcgagatcttc
gatcttttcgtcaatcccggacggaccatcccggcggcctcgaccaacatccatcacatc
accgacgccatggtcgccgatgcgcccttgatcccctccgcgctcaagcgctttcacgcc
tttgccaaggaccaggtgcttgtggcccacaatgccgccttcgacatggcgttcctggcc
aagggcgagaaggcggccggtgtcaagttcgacaatgttgtgctcgacacggttctgctc
gccgcgcacctgcagggtgccgagagcgaattgtcgctggacgggctggccgagcggttc
aatgtcgagatcgcggagcacgaccgccacacggcgcgcggcgacgcgatcgccacggct
catgtcttcgtcaagctgatccggctgctcgaggcgagcggcgtcgtcacgctgggcgac
gcgctgcgcgtttccgaggaccagacggcaatccgccgccgccaggcagcctacggataa
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