Oceaniradius stylonematis: ABWH87_12075
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Entry
ABWH87_12075 CDS
T10754
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ost Oceaniradius stylonematis
Pathway
ost03420
Nucleotide excision repair
ost03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABWH87_12075
03430 Mismatch repair
ABWH87_12075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ost03400
]
ABWH87_12075
Enzymes [BR:
ost01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABWH87_12075
DNA repair and recombination proteins [BR:
ost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABWH87_12075
MMR (mismatch excision repair)
Other MMR factors
ABWH87_12075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DUF4879
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XHC14628
LinkDB
All DBs
Position
2442161..2444764
Genome browser
AA seq
867 aa
AA seq
DB search
MSNPFDDIPFDDAHGAAPAPKPAGGGSGIAARAMGARQQPDYLTGLNPEQRRAVETTEGP
VLVLAGAGTGKTRVLTTRIAHILAQGLAWPSQVLAVTFTNKAAREMKARIGLLVGGAVEG
MPWLGTFHSIGVKMLRRHAEMAGLKSDFTILDTDDQIRLLKQLIQAEGLDDKRWPARQFA
MMIDGWKNKGFGPADIPEGDARAFANGKGRELYTAYQNRLKTLNACDFGDLLCHPIRVLK
ANPDVLAEYQQKFRYILVDEYQDTNTAQYLWLRLLAQRRVSAPTSPLRGGRRSEQSEADP
GGGDIGADTPTRLDTVSPTSPQGGGGNAAPPNICCVGDDDQSIYGWRGADVDNILRFEKD
FPGATVVKLERNYRSTAHILGAASHLIGHNEGRLGKTLFTDAADPDDPKVNVHAAWDSEE
EARAVGETIERHQRDGNNLNDMAILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERMEV
RDAMAYFRVVCQPADDLAFERIVNTPKRGLGDASVRLVHDYARRKGVPMLAAAAEIVATE
EMKPKPRAALRGVVENFARWQERLDNTPHAELAETILEESGYTAMWQADRSADAPGRLEN
LKELVRSMEEFESMRAFLEHVSLVMDAEQNEDMDAVSIMTLHAAKGLEFDTVFLPGWEEG
LFPHQRALDEGGRSGLEEERRLAYVGLTRAKRNCHIWFVSNRRIHGLWQSTIPSRFLDEL
PTDHVDVAEPPTSYGGHGGYGQSRFDRADTFSTRRESPGWRRAQANQTEATRGNWGSRSG
IAVERIGYGETDSGFGAGKGSVKGRVIEGELIAKSVADEPSAFAVGDRVFHLKFGNGNIT
AIEGNKLTIAFDKAGEKKVLDGFVEMV
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccgttcgacgatattcccttcgacgacgcccacggcgcggcgcccgcgcca
aaaccggcaggcggcggctcgggcatcgccgcgcgcgccatgggcgcccggcagcagccg
gactatctgacaggcctgaaccccgagcagcgccgcgccgtcgaaaccaccgaaggccct
gttctggtgcttgccggcgcgggcaccggcaagacgcgggtcctgaccacacgcatcgcc
catattctcgcccaggggctcgcctggccaagccaggtgctggccgtcaccttcaccaac
aaggccgcccgcgagatgaaggcacgcatcggccttctggtcggcggtgcggtcgagggc
atgccgtggctcggcacgttccattcgatcggcgtgaagatgctgcgccgccatgccgag
atggccggcctgaagtccgatttcaccatcctcgacacggacgaccagatccggctcttg
aagcagctcatccaggccgaggggctggacgacaagcgctggccggcgcgccagttcgcg
atgatgatcgacggctggaagaacaagggtttcggccccgccgacattcccgagggcgac
gcgcgcgctttcgccaacggcaagggccgggaactctacaccgcctaccagaaccgcctg
aagacactgaacgcctgcgatttcggcgaccttctgtgccatccgatccgcgtcctgaag
gccaatcccgacgtgctcgccgagtatcagcaaaagttccgctacatcctcgtcgacgag
tatcaggacaccaacaccgcgcaatatctgtggctgcggcttctggcgcagcggcgggtg
agcgcccccacctcccccttgaggggaggtcggagaagcgagcaaagcgaagctgatccg
ggtgggggtgacatcggtgccgatacccccacccggctcgacactgtctcgccgacctcc
cctcaagggggaggtggaaacgctgcaccgccgaatatttgctgcgtcggcgatgacgac
cagtcgatctatggctggcgcggggccgacgtcgacaacattctgcgcttcgaaaaggat
tttccgggcgccaccgtcgtcaagctggaacgcaactaccgctcgaccgcgcatatcctc
ggcgccgcctcccacctgatcggccacaatgaaggccggctcggcaagaccctgttcacc
gacgcagccgacccggacgaccccaaggtcaatgtgcatgccgcctgggactccgaggag
gaagcgcgcgccgtcggcgagacgatcgagcgccaccagcgcgacggcaacaatctcaac
gacatggcgatcctcgtgcgcgcctccttccagatgcgcgaattcgaggaccgcttcgtc
acgctggggctcaactatcgcgtcattgggggcccgcgcttttacgagcgcatggaggtg
cgcgacgcgatggcctatttccgcgtcgtctgccagcctgccgacgatctggccttcgag
cgcatcgtcaacacgcccaagcggggcctcggcgatgcctcggtgcgtctcgtgcacgat
tacgcgcgcaggaagggcgtgcccatgctggccgccgccgccgagatcgtcgccaccgag
gaaatgaagcccaagccgcgcgccgccctgcgcggcgtcgtcgagaactttgcccgctgg
caggaacggctcgacaacacgccacacgccgaactggccgagaccatcctcgaggaaagc
ggctacaccgccatgtggcaggccgaccgctccgcggacgcgccgggacggctggagaat
ctcaaggaattggtccgctcgatggaagagttcgaatccatgcgcgccttcctcgaacat
gtctcgctcgtcatggatgccgagcagaacgaggacatggacgcggtgtcgatcatgacg
ctgcatgcggccaaggggctcgaattcgacacggttttcctgcccggctgggaggaaggc
ctgttcccgcaccagcgcgccctcgacgaagggggccggtcgggcctcgaggaagaacgg
cgcctcgcctatgtcgggctcacccgcgccaagcgcaactgccacatctggttcgtctcc
aaccggcgcattcacggcctgtggcagtcgaccattccctcgcgctttctcgacgaactg
ccgacggaccatgtggacgttgccgaaccgcccacctcctatggcggtcatggcggctac
ggccagtcgcgctttgaccgcgccgatacgttctcgaccaggcgcgaatcgcccggctgg
cgccgcgcgcaggccaaccagaccgaggcgacgcgcggcaattggggctcgcgctcgggc
atcgccgtggagcgcatcggctatggcgagacggattcaggcttcggcgccggcaagggt
tcggtcaagggccgggtgatcgagggcgagctgatcgccaaatccgtcgccgacgagccc
tccgcctttgccgttggcgaccgggtgttccacctcaagttcggcaatggcaacatcacc
gccatcgagggcaacaagctgaccatcgccttcgacaaggccggcgagaagaaggtgctg
gacgggttcgtggagatggtgtga
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