Oceaniradius stylonematis: ABWH87_12560
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Entry
ABWH87_12560 CDS
T10754
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ost Oceaniradius stylonematis
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ost03400
]
ABWH87_12560
DNA repair and recombination proteins [BR:
ost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ABWH87_12560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
XHC14719
LinkDB
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Position
2538874..2539290
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AA seq
138 aa
AA seq
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MADVVDKATRSRMMSGIRGKDTKPEIIVRKALHKAGYRFRLHRKDLPGNPDIVLPKYRTV
IFVHGCFWHGHMCKNFKWPKTRPEFWREKIEGNIERDKRDIAALEALGWNVKVIWECEIR
SGDLSFCLELHDGASSNK
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
ttggccgacgtcgtcgacaaggccacgcgcagccggatgatgtccggcatccgtggcaag
gacaccaaacccgagatcattgtcaggaaggccctgcacaaggcgggctaccggttccga
ttgcaccggaaagacctgccggggaaccccgacatcgtcctgcccaaatacaggacggtc
atcttcgtccacggctgcttttggcacggccacatgtgcaagaacttcaaatggccaaag
acaaggccggagttctggcgagaaaagatcgagggcaacatcgagcgcgacaaacgggat
atcgcggcgcttgaagcgctcggatggaacgtgaaggtgatttgggaatgtgagatcagg
agtggcgacctatcgttttgccttgaactccatgatggagccagttcgaacaaatga
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