Oceaniradius stylonematis: ABWH87_12780
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Entry
ABWH87_12780 CDS
T10754
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
ost Oceaniradius stylonematis
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ost03000
]
ABWH87_12780 (soxR)
Transcription factors [BR:
ost03000
]
Prokaryotic type
Helix-turn-helix
MerR family
ABWH87_12780 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_17
HTH_24
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
XHC14761
LinkDB
All DBs
Position
2580174..2580662
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AA seq
162 aa
AA seq
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MPRKSPFLTIGEVAARTGLAVSAIRYYADEGLITALRSEGGNRRFTRSEIRKVSFIAISQ
RLGFSLAEIRGQLDRLPGDRPPTKADWARISTGFRDAIDERMAQLERLRDRLDGCIGCGC
LSLDTCAIYNGDDKAAALGPGANWVEKRESDLGRPVRPQPAG
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcgcaagagccctttcctgaccatcggcgaggtggccgcacgcaccggtctcgcg
gtctccgcgatccgctactatgccgacgagggcctgatcacggcgctgcgcagcgaaggc
ggcaaccgccgcttcacgcgctccgaaatccgcaaagtgtcgttcatcgcgatatcgcag
cgcctgggcttctcgctggccgagatcaggggccaactggaccggcttcccggcgaccgc
ccgcccaccaaggccgactgggcgcggatcagcaccggcttccgggacgcgatcgatgaa
cggatggcgcagctcgaacgcctgcgcgaccggctcgacggatgcatcggctgcggatgc
ctctcgctcgacacctgcgcgatctacaatggcgacgacaaggccgccgcgctcggtccc
ggcgccaactgggtggaaaagcgtgaatcggacctgggccggccggtcaggccccagccg
gcgggatga
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