Oceaniradius stylonematis: ABWH87_13445
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Entry
ABWH87_13445 CDS
T10754
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ost Oceaniradius stylonematis
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ost03032
]
ABWH87_13445
03400 DNA repair and recombination proteins [BR:
ost03400
]
ABWH87_13445
Enzymes [BR:
ost01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABWH87_13445
DNA replication proteins [BR:
ost03032
]
Prokaryotic type
DNA Topoisomerases
ABWH87_13445
DNA repair and recombination proteins [BR:
ost03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABWH87_13445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
THDPS_N_2
Motif
Other DBs
NCBI-ProteinID:
XHC14886
LinkDB
All DBs
Position
2715424..2716431
Genome browser
AA seq
335 aa
AA seq
DB search
MPTADDAPPPGLVYYPDSRPGIRRKRHGRGFTYLAADGTRIDCARERARLKALAVPPAYE
DVWMSPLANGHLQATGRDARRRKQYRYHPDWTKARSDGKFDQLATFGATLPALRRWISDR
LTGEVGDLETAVAAVLALIDRGALRVGDPGYTADNGSFGATTLRNRHVRFDGTRVHLDFV
AKGGKRVHQTVVGAQLQRVLQRSRDLPGSELVTWLADDGTPRIVRSEHLGDVLARICGDG
TTAKSLRTWHGTHAAFMAATKPEPLTIRIMSEAAAERLNNTPSIARTSYIHPAIIALAEL
SDDERATRLDALGDDTRDGLRRGEAALLACLREAA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggctgacgacgcgccgccgcccggcctcgtctattatcccgacagccggccc
ggcattcgccgcaagcggcacgggcgcggcttcacctatctggcggccgacggcacgcgg
atcgactgcgcgcgcgaacgggcgcgcctgaaggccctcgcggttccgcccgcctatgag
gatgtctggatgtcgccgctcgccaacggccatctgcaggcgaccggccgcgacgcgcgc
cgccgcaagcaatatcgctatcatcccgactggaccaaagcccgctccgacggcaagttc
gaccaactggcgacgttcggagcaaccctgcccgcgctgcgccgctggatcagcgaccgc
ctgaccggcgaggtcggcgaccttgaaacggcggtcgccgctgtcctggcgctgatcgac
cgcggcgccctgcgcgtcggcgatcccggctacaccgccgacaatggcagcttcggcgca
acgacgctgcgcaaccggcatgtccggttcgacggcacgcgtgtgcatctcgacttcgtc
gccaagggcggcaagcgcgtgcaccagacggtggtcggcgcgcaattgcagcgcgtcctt
cagcgcagccgcgacctgcccggcagcgaactggtcacatggctcgccgatgacggcacg
ccgcgcattgtccgctcggagcatctgggcgacgtgcttgcgcgcatctgcggcgatggc
accaccgccaagagcttgcgcacctggcacggcacccatgccgccttcatggccgccacg
aaacccgaaccgctgaccatcaggatcatgagcgaagcggcggccgaacggctgaacaac
acgccgtccatcgcgcgaacgagctacatccatccggcgatcatcgcgctcgccgaactg
tcagacgacgaacgcgcgacgcggctggatgctctgggcgacgacacgcgcgacggcctg
cgccggggcgaggctgcgctgctcgcctgtctgcgagaggcggcctga
DBGET
integrated database retrieval system
