Oceaniradius stylonematis: ABWH87_13515
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Entry
ABWH87_13515 CDS
T10754
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ost Oceaniradius stylonematis
Pathway
ost02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABWH87_13515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ost02000
]
ABWH87_13515
Transporters [BR:
ost02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABWH87_13515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
XHC14900
LinkDB
All DBs
Position
complement(2730414..2731556)
Genome browser
AA seq
380 aa
AA seq
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MKLKSILMATAAAGVLALPAFAEGDMSLAEAPCENCADELTVVSWGGAYQNSQIKAYSEP
YAEATGVTFVWDESSAEAVAKLRAMSEAGNVTWDVVDVVASDAIRLCDEGLAIEIDGATE
LAPAPDGTSADDDFGVLRVNDCFVPQIVYSTTFGYRTDVAEWNGAVPDDICDIFDLETFP
GKRSLQRRPIDNMEWATYCNGTPKDEIYDVLSTDEGIAAALAKLDTIKDQVVWWTAGAET
PQLLADGEVVMGSTFNGRLFSAIAEQDQPIAMMWDMQSFDLDGWIIPEGLDEARLNRAKH
FLKFATDTQRLADQAKYISYGPARASSAPLVGTHAELGIDMAPHMPTDPANAANVHNYDY
TWWADNRDDIDAKFQAWLVQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaagtcaattctcatggcgaccgcggcggctggcgtgctggctttgccggcg
tttgccgaaggcgacatgtcgctggccgaggcgccctgcgagaactgcgccgatgaactg
accgtcgtctcctggggcggcgcctatcagaattcgcagatcaaggcctattcggagccc
tatgccgaggcgacgggcgtgaccttcgtttgggacgaatcctcggccgaggccgttgcc
aagctgcgcgccatgagcgaagccggcaacgtgacctgggacgtcgtcgatgtggtggct
tcggatgcaatccgcctgtgtgacgagggtcttgcgatcgagatcgacggcgcgaccgaa
ctggcccccgctccggacggcacgtcggccgacgatgatttcggcgtgctgcgcgtcaac
gactgcttcgtgccgcagatcgtttattcgacgacattcggctatcgcaccgatgtggcc
gagtggaacggtgccgtgcccgatgacatctgcgacatcttcgacctggaaaccttcccg
ggcaaacggtcactgcagaggcgtccgatcgacaacatggaatgggcgacatactgcaac
ggcacaccgaaagatgaaatctacgatgtgctgagcaccgacgagggtatcgcagccgcg
ctcgccaagctcgacacgatcaaggaccaggtcgtctggtggacggccggtgccgagacg
ccgcagctgctggccgacggcgaagtcgtgatgggttcgacgttcaacggccgcttgttc
tcggcgatcgccgagcaggaccagcccatcgccatgatgtgggatatgcagtcgttcgac
cttgacggctggatcattccggagggcctggacgaggcacgcctcaaccgcgccaagcac
ttcctgaagttcgccaccgacacgcagcgtctggcggaccaggccaagtacatctcctac
ggcccggctcgtgcatcgtccgcgccgctggtgggcacccatgccgagcttggcatcgac
atggcgccgcacatgccgaccgatccggcgaacgctgccaacgtccacaattacgactac
acctggtgggccgacaatcgcgacgacatcgacgcgaaattccaggcctggctggttcag
taa
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