Oceaniradius stylonematis: ABWH87_14120
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Entry
ABWH87_14120 CDS
T10754
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
ost Oceaniradius stylonematis
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ost01011
]
ABWH87_14120
Enzymes [BR:
ost01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ABWH87_14120
Peptidoglycan biosynthesis and degradation proteins [BR:
ost01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ABWH87_14120
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_3
PG_binding_2
Amidase_5
DUF7912
Motif
Other DBs
NCBI-ProteinID:
XHC15012
LinkDB
All DBs
Position
complement(2840937..2842157)
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AA seq
406 aa
AA seq
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MTKGCKSGLAVGLAALMAVVMLAGTAPARADAGFQQWIRDFRATAVANGVDGRVYDRAFA
NVRTPDAEVLRKARFQPEFRDEAWQYIDARVNERTIGDGRAMLRKHGRLLDRIERSTGVS
KHILLAIWSMESSYGEALTQPGRLHYVPRALATLAYADRRRAKFARSQLIAALKIAQRGD
VAVEGLTGSWAGAMGHTQFIPTSYKAYAVDGDGDGRRDIWNSIPDALYTAASLLKNNGWR
SGETWGYEVVLPPGRKFPGGQMTLREWQRIGVVRANGEPFPRPGQQAELKVLQGRDGPAF
LMIRNFFVIKRYNNADKYALGVGLLADQIAGFPPPSRDWTRPFTRLTVAESEELQQRLKR
QGFYEGDVDGKIGPMSRSAIKAFQASRGLAQDGYASMEVLEVLRRR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggggtgcaaaagcgggctggcggtcggactggcagctttgatggcggtggtc
atgctggccggcacggcgccggcgcgcgccgatgccggcttccagcaatggattcgcgat
ttccgcgcgacggcggtggccaacggcgttgatgggcgcgtctatgaccgcgccttcgcc
aatgtgcgcacgccggatgccgaggttctgcgcaaggcgcgcttccagcccgaattccgc
gacgaggcgtggcaatatatcgatgcgcgcgtcaacgaacgcaccatcggcgacgggcgg
gcgatgttgcgcaagcacggccgcctgctggaccggatcgagcgctccacgggtgtatcc
aagcatatcctgctggccatctggtcgatggaatcgagctatggcgaggcgctgacgcag
ccgggccggctgcactatgttccgcgcgcgctggccacgctcgcctatgccgaccgccgc
cgcgccaagttcgcgcgcagccagttgatcgccgcgctcaagatcgcccagcgtggcgat
gtggcggttgaggggctgaccggctcctgggccggcgcgatgggccacacccagttcatt
cccacaagctacaaggcctatgccgtcgatggcgatggcgacggccgccgcgacatctgg
aactcgatccccgatgcgctctacaccgcggccagcctgttgaagaacaatggctggcga
tcgggcgagacctggggctacgaggtggtgctgccgcccgggcgcaagttccccggcggg
cagatgacgctgcgcgaatggcagcgcatcggcgtcgtgcgcgccaatggcgagcctttt
ccgcgcccgggccagcaggccgaactgaaggtcctgcagggccgcgacgggccggccttc
ctgatgatccgcaatttcttcgtcatcaagcgctacaacaatgccgacaaatatgcgctg
ggcgtgggccttctggccgaccagatcgccggtttcccgccgcccagccgcgactggacc
cggccattcacgcgtctgacggtggccgaaagcgaggagctgcagcagcggctcaagcgc
cagggattttacgagggcgacgtcgacggcaagatcgggccgatgtcgcgcagcgcgatc
aaggccttccaggcaagccgcggcctcgcccaggatggctatgcctccatggaggtgcta
gaagtgctgcgccggcgctag
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