Oceaniradius stylonematis: ABWH87_15090
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Entry
ABWH87_15090 CDS
T10754
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ost Oceaniradius stylonematis
Pathway
ost02020
Two-component system
ost02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABWH87_15090
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABWH87_15090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ost03000
]
ABWH87_15090
Transcription factors [BR:
ost03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
ABWH87_15090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HTH_29
HTH_23
HVO_A0261_N
HTH_11
RepL
GntR
MarR_2
HTH_AsnC-type
Phage_T7_55
DUF977
HTH_24
Fe_dep_repress
Fe-S_assembly
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
XHC15194
LinkDB
All DBs
Position
3044798..3045472
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AA seq
224 aa
AA seq
DB search
MTGKPEATWRMPNQLASMISELRHLVREKTFRAGEQIYAQGEPSNSFYFVVSGLVQISIF
RIDGVEIVLEKMGPDTICGEATAFAGLPSFSSAVATEPTTVLEFEARRLPDLFREHPEFA
LILLRLTSLKQRVLALRLEQMVSNKPEERVLELLTRLGEMFGTRHAKGNMVRTRLTHEMI
AAMTGVSRVTVTRTLKRMRESGTLYLDDGYFVISPAHAERLDVG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtaagccggaagccacgtggcgcatgccgaaccagctggcttcgatgatctcg
gagctgcgacatctggtgcgggaaaagacgttccgggccggcgagcagatctatgcgcag
ggcgaaccgagcaacagcttctatttcgtcgtcagcgggctcgttcagatatcgattttc
cgcatcgacggcgtcgagatcgtgcttgaaaaaatgggccccgacacgatctgcggcgag
gcgacggcttttgcgggtttacccagcttctcgtccgcggtggcgaccgagccgaccacg
gtcctcgagttcgaggcgcgcaggctgcccgatctgtttcgcgagcaccccgagttcgcg
ttgatcttgttgcggctgacgagcttgaagcagcgtgtgttggcgcttcgcctcgagcaa
atggtctcgaacaagcccgaggagcgcgtgctcgaattgttgacgcggctcggcgagatg
ttcggcacgcgtcacgccaagggcaatatggtgcgcacgagactgactcacgaaatgatc
gccgccatgaccggcgtttcgcgtgtgaccgtcacgcggaccctcaaacgcatgcgcgag
agcgggaccctctatctcgatgacggctatttcgtcatttcgccggcccatgccgaacgg
ctggatgtcggctag
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