Oceaniradius stylonematis: ABWH87_17450
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Entry
ABWH87_17450 CDS
T10754
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ost Oceaniradius stylonematis
Pathway
ost03030
DNA replication
ost03430
Mismatch repair
ost03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ost00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWH87_17450 (holA)
03430 Mismatch repair
ABWH87_17450 (holA)
03440 Homologous recombination
ABWH87_17450 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ost03032
]
ABWH87_17450 (holA)
03400 DNA repair and recombination proteins [BR:
ost03400
]
ABWH87_17450 (holA)
Enzymes [BR:
ost01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWH87_17450 (holA)
DNA replication proteins [BR:
ost03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABWH87_17450 (holA)
DNA repair and recombination proteins [BR:
ost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABWH87_17450 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
XHC15615
LinkDB
All DBs
Position
3532219..3533253
Genome browser
AA seq
344 aa
AA seq
DB search
MAQLKNHEADRFIARPDRDYTIYLVYGPDHGLVSERASALAKGSGVPLDDPFSTIRIDAA
SPGADPERLVNEAYTVGMFGGRRLIWLRGAGNDRALLGQIDMLLGDPPADTMIIVEAGDL
KKGGLRGAVEKAPAGLAIACYTDNDRALQELIDRTFSAAGLRLELDARRFLIDHLGGDRA
ASRAELDKIALYALGQPTVTLSDVQAICGDASALGFDDISMAVLTGDLKALDRAVVKFES
GGGAPSALLAILTRQFQALDRIRADMDMQGKNPAAAVAHARPPVFFARRQAMEQAVAIWS
APAIRAGLGRLREAVLQARQSRHLETDVLRMTLLALTVQSARRR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttggcccagctcaagaaccacgaggccgaccgcttcatagcccggcccgatcgcgactac
acgatctatctggtctacgggccggatcacggtctggtgtcggaacgcgcctcggcgctg
gccaaagggagcggtgtgccgctggacgatccgttcagcacgattcgcatcgacgccgcg
agccctggggcggaccccgaacggctggtcaacgaagcctacacggtcggcatgttcggc
ggccgccggctgatctggctccgaggcgcgggaaacgatcgagcactgctcggccagatc
gacatgctgctcggcgacccgccagcggacacgatgatcattgtcgaggccggcgatctc
aagaagggcggcctgcgcggggcggtcgaaaaggctccggccggcctcgcaattgcctgc
tacaccgacaacgacagggcacttcaggagctgatcgaccgcacattttctgcggccgga
ctacggctggaactcgatgcgcgtcgttttctgatcgatcatcttggcggcgaccgggcc
gcctcgcgcgccgaactggacaagatcgcgctttatgcgctcggccagccaacggtgaca
ctgtctgacgtgcaggccatttgcggcgacgcgtcggcactggggtttgacgacatttcg
atggccgtgctgacgggcgatctcaaggcgctcgaccgcgcggtggtgaaattcgaaagc
ggaggcggtgcgccatcggcgctgctggcgatcctgacacggcagttccaggcgctggac
cggatccgtgccgacatggacatgcaggggaaaaatcccgccgcggcggtggcccacgcc
aggccgccggtcttcttcgcgcgccgccaggcaatggagcaggcggtcgcgatatggagc
gcgcccgccattcgcgccgggcttggccgtttgcgtgaagcagtccttcaggcccgccag
tcgcgacacctcgaaaccgacgtcctgcgtatgacgttgctggcgctcactgtccagagc
gctcgccggcgttag
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