Oceaniferula spumae: NT6N_08000
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Entry
NT6N_08000 CDS
T11191
Name
(GenBank) selenocysteine-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
osu Oceaniferula spumae
Brite
KEGG Orthology (KO) [BR:
osu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
osu03012
]
NT6N_08000
Translation factors [BR:
osu03012
]
Eukaryotic type
Elongation factors
NT6N_08000
Prokaryotic type
NT6N_08000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
MMR_HSR1
RsgA_GTPase
WHD_2nd_SelB
PF0610-like_N
FeoC
GTP_EFTU_D2
Septin
HflX_C
Motif
Other DBs
NCBI-ProteinID:
BDS05760
LinkDB
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Position
926552..928462
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AA seq
636 aa
AA seq
DB search
MSSYLVLGTAGHIDHGKSSLVKCLTGSDPDRLPEEKKRGVTIELGFAHMSLEDGDSSYEI
GIVDVPGHADFVNNMVAGVGALDLAIFIIAADDGWMPQSEEHLHILSYLGIKNIVIALTK
SDLCEDVPFSIEVLRDELIGTSIADAPIVPVSSITGEGVDELKKVLLEKLKLCPPHTDSG
KARLAIDRIFSPKGTGTVVTGTLSGGAVNLGETMTLQPLGLDTKIRYIQNHNQSLETAQS
GMRTALNLPDLPIAAPGKTGAQRGHSLCTPGIGKSTRTLDIHLQRLARPIPGFKPRALKN
TETVVLHHGSTRCHARVILNDRTQLNPGEECLAQLRLETPLFFLTGDRVVLRDGSQQSTL
GGGTVLDTQPKRQGFRTEKRATFLQPRADNPDDVRTYLTTLLHRDHQLAPVEPLPNNPFH
SDTISAAIDSLLAENIIVSHDGLFLDADWWNEQLDAAGKAIKSWHQKRPDIPSMPLDELS
KLLPDVPASIFAHLPSAMEQRGYQSSGKGLASTSHKLTLPDEIAPEANAILKTLEQSGLQ
PPNKADLTATAKSDQAMKFLIRSGQAIELDPKVVISTSVRDAASDRVKAFITEKGQATAS
ELRQHLDSTRKVVMPLLEHLDAIGLTVRNDNFRTLK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctatcttgtcctaggcaccgcaggccacatcgaccatgggaaatcatctctg
gtcaaatgtctaaccggctctgatccagaccgcttaccggaggaaaaaaagcgcggagtc
accatcgaactgggtttcgcccacatgtctctggaagatggcgacagcagttacgaaatc
ggaatcgtcgatgtccccggccacgccgacttcgtcaacaacatggtcgctggtgtcggt
gcgctcgatctcgcgatcttcatcatcgctgccgacgatggctggatgccccagtccgaa
gaacacctgcacatcctctcttatctcggcatcaagaacatcgtcatcgccctgacaaaa
tccgacctctgcgaggacgtcccattctccatcgaagtcctgcgcgacgaactcatcggc
acatccattgcagatgcccccatcgttcccgtgtcgtccatcaccggcgaaggcgtcgat
gagctaaaaaaggtattgttagaaaaattaaaactctgcccgccgcacaccgatagtggt
aaagcccgactcgccatcgaccgcattttctcaccgaaaggcaccggcaccgtggtcacc
ggcaccctcagcggcggtgcggtgaacctcggcgaaacaatgaccctgcaaccgctcgga
cttgataccaagatccgctacatccagaaccacaatcaatcgctggaaaccgcccagtct
ggcatgcgcactgccctgaacctgccggacctccccatcgccgcccccggaaagaccggt
gcccagcgtggacactcactctgtactccgggtattggaaaatcgacccgcaccctcgat
atccacctgcagcgactcgccagacccatccccggtttcaaaccccgcgccttgaaaaac
accgagaccgtagtcttgcaccacggctccacgcgctgccacgcccgtgtcatcctcaac
gatcgcacccagctcaatcccggcgaagaatgcttggcccagctgcgactggaaacgccg
ctattttttctgacaggcgaccgtgtcgtcttacgcgacggctcccagcaaagtacccta
ggcggcggaaccgtgttagatacacaacccaaacgacaaggcttccgcaccgagaaacgc
gccaccttcctccagccacgtgctgataatccagacgatgtcagaacctacctcaccacc
cttcttcaccgcgaccaccagcttgctcccgtagagccgctacctaacaatccgttccac
tcagacaccatctctgccgccatcgactccctgttggctgaaaacatcatcgtcagccac
gatggattattcctcgatgccgattggtggaatgaacaactcgacgccgctggcaaagcg
atcaaaagctggcaccagaagcgccccgacatcccctcgatgccactggatgaactatcc
aagctccttccagatgtgccagcctccatcttcgcccacctcccctctgccatggagcag
cgcggctaccagagcagcggcaaaggcctggccagcaccagccacaagctgaccttgccc
gatgagatcgcacccgaggccaatgccattctcaagactctcgagcaatccggcctccag
ccacctaacaaagccgatctcaccgccacggcgaagtcagaccaagcgatgaaattcctc
atccgctccggccaagccattgaacttgatcccaaagtggttatcagcaccagcgtgcgc
gatgctgcgtcagatagagtgaaggctttcatcaccgaaaaaggtcaggccactgccagc
gaactgcgccagcacctcgattccacccgcaaagtggtcatgcccttgttagagcacctc
gacgccatcggcctgaccgttagaaacgataacttccgaactttaaaatga
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