Oceaniferula spumae: NT6N_08340
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Entry
NT6N_08340 CDS
T11191
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
osu Oceaniferula spumae
Pathway
osu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT6N_08340 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osu03019
]
NT6N_08340 (pnp)
03016 Transfer RNA biogenesis [BR:
osu03016
]
NT6N_08340 (pnp)
Enzymes [BR:
osu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NT6N_08340 (pnp)
Messenger RNA biogenesis [BR:
osu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NT6N_08340 (pnp)
Transfer RNA biogenesis [BR:
osu03016
]
Prokaryotic type
tRNA degradation factors
NT6N_08340 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
MatB
OB_RRP5_4th
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
BDS05794
UniProt:
A0AAT9FIJ8
LinkDB
All DBs
Position
complement(960644..962797)
Genome browser
AA seq
717 aa
AA seq
DB search
MNMNIEKITIPVGSNPITLETGKLAKLADGAVQVQSGETVLLVTAVSQTKIREGQTWFPL
SVEYKERAAAAGVFPGGYFKREGRPTEKEILTCRMTDRPLRPLFPKGYLYDTQIVALMLA
ADGVNDADILSMNGASAALCISDIPFAGAIGAVRVGRVDGEFIVNPTFEQREDSDLDLVY
VGNKTECIMIEGAANEIPDAEFVKALHFAQSQVAIIVDAIEGFAAKVGKPKREYTVTVAK
EDLLEIAYEVAGDRIEDAIYAPNKVERGKKVGALRDEVEATLKERVPNVSEFEIEQCFEY
IQKKAFRIAIMEKGIRADGRDIDTLRPLYAEAGTLPRVHGSSIFARGETQALATATLAPA
DERQYFDNYAGGEDSKRFILHYSFPPFSVGEAGRFGGLNRREIGHGALAERSIEPVIPAE
EDFPYAMRVTSEVLESNGSSSMATVCSGVMALLDAGVPLIRPVGAIAVGLVTEMDENDNI
KEYKTLLDIIGSEDFYGDMDFKLCGTSEGITGYQLDLKLPGVPLSILEEAVVKAAGGREK
VLTKMHETIATPAALSEHAPRIESTKIDPERIGELIGPGGKNIKGIQAESGADINIEDDG
TVHVYASKKESLDRAMEMIKQMFAEVEVGTVYTGQIVSTTNFGAFMQIMPGKDGLIHISE
LAEGRVEKTEDVVKKGDTVTAKCIGVDDRGRVKMSIRAAAREAKQQEASDAPETVEA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaacattgaaaaaataacgatccccgtgggatcaaacccgatcactctcgag
acgggtaaactggccaagttggccgacggcgccgttcaggtgcagtcaggagaaaccgtg
ctgctcgtcaccgccgtttcccaaaccaaaatccgtgagggccagacctggttcccattg
tccgttgaatacaaagagcgcgctgctgccgctggtgttttccctggtggctacttcaag
cgcgaaggacgtcctaccgaaaaggaaatcctcacctgccgcatgaccgaccgtccactg
cgtccgcttttccccaaaggctatctctacgacacccaaatcgtcgcactcatgctcgcc
gctgacggcgtcaacgatgccgacatcctctccatgaacggcgcatccgccgccctctgc
atctcagacatcccattcgctggcgccatcggtgctgtgcgcgtaggccgtgttgatggt
gagttcatcgtgaacccaaccttcgaacagcgcgaagacagcgatctcgacctcgtttac
gtcggtaacaaaaccgagtgtatcatgatcgaaggtgctgcgaacgaaatcccagacgcg
gaattcgtcaaggctctccacttcgcccagagccaagtggccatcatcgttgatgccatc
gaaggatttgctgccaaagtcggcaagcctaagcgcgaatacaccgtcaccgttgccaag
gaagacctccttgaaatcgcttacgaagttgctggcgaccgcatcgaagacgccatctac
gcccctaacaaggttgagcgtggtaagaaagtcggcgccctgcgcgacgaagtcgaagcc
accctcaaggagcgcgttcctaacgtttccgagttcgaaatcgagcagtgcttcgagtac
atccagaaaaaggcattccgcatcgccatcatggaaaaaggcatccgtgccgacggccgt
gacatcgataccctccgcccactctacgccgaagccggcactcttccacgcgttcatggt
tcgtccatcttcgcccgtggtgagactcaggctctggcaaccgccacactggcacccgcc
gacgagcgtcaatactttgacaactacgccggtggtgaggacagcaagcgcttcatcctt
cactacagcttccctccgttctccgtgggtgaagccggtcgcttcggtggcctgaaccgt
cgtgaaatcggtcacggtgcgctcgccgagcgttccatcgagccagtcatcccagccgaa
gaagacttcccatacgcgatgcgtgtgacttccgaggtgcttgagtcaaacggctcatct
tccatggccaccgtttgttccggagtcatggctctgctcgatgctggtgtgccactgatc
cgccctgtgggtgcgatcgccgttggtcttgtcaccgagatggacgaaaacgacaacatc
aaggaatacaagaccctgctcgacatcatcggatccgaggacttctacggcgacatggac
ttcaaactctgtggcaccagcgaaggtatcaccggctaccagcttgacctcaagctccca
ggtgttcctctttccatcctcgaagaagccgtggtcaaggccgccggcggacgtgagaag
gtgcttaccaagatgcacgaaaccatcgccaccccagccgctctctccgagcacgctcca
cgcatcgaatctaccaagatcgatccagagcgcatcggtgaactcatcggaccaggaggt
aagaacatcaaaggcatccaggctgagtccggtgctgacatcaacatcgaggacgacggc
actgtgcacgtttacgcttccaagaaggagtccctcgatcgtgcgatggagatgatcaag
cagatgttcgcggaagtcgaagtcggcacggtttacaccggtcaaatcgtctccaccacg
aacttcggtgccttcatgcagatcatgcccggcaaagacggcctcatccacatctccgag
ctggccgaaggccgtgtggagaagaccgaggacgtggtcaaaaaaggcgacaccgtcact
gccaagtgcattggcgtcgatgaccgcggtcgcgtcaagatgtccatccgcgctgccgcc
cgcgaggccaagcagcaggaagcatcagacgcccctgaaactgtcgaagcgtaa
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