Oceaniferula spumae: NT6N_09600
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Entry
NT6N_09600 CDS
T11191
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
osu Oceaniferula spumae
Brite
KEGG Orthology (KO) [BR:
osu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osu03032
]
NT6N_09600 (gyrB)
03400 DNA repair and recombination proteins [BR:
osu03400
]
NT6N_09600 (gyrB)
Enzymes [BR:
osu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NT6N_09600 (gyrB)
DNA replication proteins [BR:
osu03032
]
Prokaryotic type
DNA Topoisomerases
NT6N_09600 (gyrB)
DNA repair and recombination proteins [BR:
osu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NT6N_09600 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BDS05920
UniProt:
A0AAT9FIT1
LinkDB
All DBs
Position
complement(1139887..1142463)
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AA seq
858 aa
AA seq
DB search
MTDTPNEPELGPENDPDDANTNVSDAQEYGASQIDKLEGLEAVRKRPGMYIGDPDVRGLH
HCVFEVLDNSIDEHLAGHCKKISISLHVDGSCSIADDGRGIPVEMHPKFGIPAVELVLTS
LHAGGKFGQGAYKYSGGLHGVGAKCVNALSDWFKAEVSRDGKVHSITFERGKTTKPLEVV
GEVDKNHTGTTITFFPDATIFVDTIEFEFARLSTRLRELAFLNPGLIIELEDERPESAKK
ERFYYAKGIEEFVAQLGENKTLVHPDPVIIKGKRKIEIDYDGKIAKDDVFADIVFQYNDS
YQDNILCFANSIPNADGGTHLTGFRGALTRSINQYAKVNKILKDKDPALSGDDVREGIIC
VLSVKMPNPRFSSQTKDKLVNAEIEGVVSSIVYEGLQAYFDENPNLAKTIIDKAVNAARA
REAARKARETVRKSVLSGGGLPGKLADCSERDPAKSEIYIVEGDSAGGSAKSGRNRINQA
ILPLRGKVINVEKARLHRALQNKEIQAMITAIGAGIGEGDQEGAFDIGKVRYHKVVIMTD
ADIDGAHIRTLLLTFFCRHMPELVKAGYLYIAQPPLYKVTRKKREEYIADDNALNEILIR
LGSEDVTLKKHGSDETVDSDLLKSVLDTLAQLTRFTRTLAGHGGDFRDLLDHRKDGHLPE
FMVRLRIGNEENITYFDTEKELLAFAHDNRDLGLFDEVLTEEEEAEYKERFQGVQRRAVK
RELHESTAIAKILARLNEFGVQTDPFFSDDKPIYELIEGDSGDAPLPVFNLFEILDRVLE
IGRRGMRIQRFKGLGEMNAKELYATTMDPATRQFLQVRLDEENAIEADKMFDVLMGDIVE
PRKRFIEDNALNVQNLDV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacgccaaacgagcctgaactagggccagaaaacgatcctgatgatgccaat
accaacgtctctgatgcccaagaatatggcgcatcccagatcgataaattagaaggtctt
gaagccgtccggaagcgccccggaatgtatatcggcgatcctgatgtgcggggtttacac
cactgtgtgttcgaggttttggataactccatcgatgaacacctcgcaggtcactgtaag
aaaatcagcatctcactgcatgtggacggctcatgttccattgcggacgatggtcggggt
attcccgtcgagatgcacccgaagttcggaatcccagctgttgaactggttctgacaagt
ctgcacgcaggtggtaaattcgggcaaggtgcttacaaatactccggcggcctgcacggt
gtcggtgccaagtgtgtgaacgccctgtcggactggttcaaagctgaagtgagcagggat
ggtaaagtccactcgatcacctttgagcgcggtaagacaaccaagcctctggaggtcgtc
ggtgaagtggataaaaaccacaccggcaccactattacgttcttcccggacgccaccatt
tttgttgataccatcgagttcgagtttgcccgtctctccacccgcctgcgcgaactggca
ttccttaaccccggcctgatcattgaacttgaggacgaacgtccggaaagcgctaagaag
gagcgtttttattatgccaaaggcatcgaggaatttgtcgcccagctgggcgaaaacaaa
accttggttcaccctgatccagttatcatcaaggggaaacgcaaaatcgaaattgattac
gatggcaagatcgccaaggacgatgtcttcgccgatatcgttttccaatacaacgatagc
tatcaggacaacatcctctgtttcgccaactccattccgaacgccgacgggggaacccac
ctgactggcttccgtggcgctctaacaagatcgatcaaccagtatgccaaggttaacaag
atcctgaaggataaagacccagctctctctggtgatgatgtgcgcgaaggcattatctgc
gtgctcagcgtcaagatgccgaacccacgattcagctcacagaccaaggataagctggtc
aacgccgaaatcgaaggtgtcgtcagctccatcgtttacgaaggcctgcaagcctacttc
gatgaaaatccgaacctcgccaagacaatcatcgataaggcggtcaacgctgcccgtgct
cgagaagcagcacgcaaggcgcgggaaaccgtgcgcaagtccgtgctctccggcggtgga
ctgcccggaaaactcgcagactgctcggagcgcgacccggctaaatctgaaatctatatt
gtggaaggtgactccgcaggtggttccgccaagtccgggcgtaaccgtatcaaccaagcg
atccttccgctccgtggtaaagttatcaacgtggaaaaagcccggttgcacagagcgctg
caaaacaaggaaatccaggccatgatcactgccattggcgcaggaatcggggagggggac
caggaaggagccttcgacatcggaaaagtccgctaccacaaggttgtgatcatgaccgat
gccgatatcgacggagctcacatccgaaccttgctgctaacgttcttctgccgtcacatg
ccggagttggtcaaagccgggtatctctacattgcgcagccgccgctctacaaagtgacc
cgcaaaaaacgcgaggagtacatcgccgatgacaatgccctgaacgaaatcctcatccgt
ctcggctccgaggacgtgactctgaaaaaacacggctcagatgaaacggtcgacagcgac
ttactcaagagtgtgttagacaccctcgctcagctcacacgtttcactcgcacactggcc
ggacacggtggtgatttccgagatctgctagatcatcgtaaagacggtcacttgcccgaa
ttcatggtgcgcctccggattggtaacgaagagaacatcacttacttcgacaccgaaaaa
gagctgctagccttcgctcacgataaccgtgacctcggacttttcgatgaagttctcacc
gaagaagaggaggctgaatacaaggagagattccaaggtgttcagcgtcgcgccgtgaaa
cgtgaactccatgagtccacggccattgccaagattctcgcccgcttgaacgagttcgga
gtgcagaccgatccgtttttctccgatgacaaaccaatctacgaactcattgaaggcgac
tccggtgatgcaccactaccagtcttcaacctcttcgaaattctcgacagagtcttggag
atcggtcgccgaggcatgcgaatccagcgattcaaaggactgggtgagatgaatgccaag
gagctttacgccaccaccatggatccagcgactcggcagttcctccaagtccgtctggat
gaagagaacgccatcgaagccgacaaaatgttcgacgtcctcatgggcgacatcgtcgaa
ccccgtaaacgctttatcgaagacaacgccctcaacgtgcagaatctggacgtctaa
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