Oceaniferula spumae: NT6N_25490
Help
Entry
NT6N_25490 CDS
T11191
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
osu Oceaniferula spumae
Pathway
osu03030
DNA replication
osu03430
Mismatch repair
osu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NT6N_25490
03430 Mismatch repair
NT6N_25490
03440 Homologous recombination
NT6N_25490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osu03032
]
NT6N_25490
03400 DNA repair and recombination proteins [BR:
osu03400
]
NT6N_25490
Enzymes [BR:
osu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NT6N_25490
DNA replication proteins [BR:
osu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NT6N_25490
DNA repair and recombination proteins [BR:
osu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NT6N_25490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
BDS07509
UniProt:
A0AAT9FNC8
LinkDB
All DBs
Position
complement(2932336..2935845)
Genome browser
AA seq
1169 aa
AA seq
DB search
MSDSFVHLHVHTEYSTLDSTVRTKALVARAVELNMPAVAMTDHGNLYAAVEFYQNATRAG
VKPILGCEIYLAPASLYDKVETPGRKNSSHLTLLAKNETGWKNLVKLISIGHLDGDYLGE
PRVDREQLAKFSEGLICLSGCINGAVNEWLQKKDLDAARAEAIALRDMFGPDDFYLELND
QSLEIQQELNKQLKALSEELGVKLVATNDVHFLNKEDSEAHDVLICIGQGRLLLDENRKS
YPVDHYFKTPEEMRELFADFPGACDNTLEIAEKCNVEMVLDATSSEKYPQFESPDGSPRE
EYFRKVCFDGLASRYANGKLEKLAEGLKKTPEEMQKVLDERLDYEIKTINDLGFASYFLI
TADFIQWGRDNDIPVGPGRGSAAGSLVAYTMGITDICPMRFGLLFERFLNPERVSPPDVD
IDFCQTRRTEVIEYVRQKYGERSVSHIITYGTLGAKSVIRDVSRVMGISYGDADMLAKMI
EAKPGVKLQGEYDEKQELRDIIENSSTWQDLWGYAIKLEGVKRNTGVHAAGVVIGDRALD
EHCALTRGNEGEVVTQADMNSITELGLLKMDFLGLKNMTVIQDAVNHIREHTPDFDINEI
SLEDKPTLALLNRGETMGVFQLESGGMVETCRKYGIDKIDDIIDLLALYRPGAMDYIDQM
IEVKKGIKPVRYEHPLLEVICGDTYGVMIYQEQVQNAAKMLAGYTLGGADILRRAMGKKK
PEEMAKQREIFVAGAKETNDIDAPLANQIFDKIAGFAGYGFNKSHSACYGHISYWTAYLK
ANHPVEFMSGLLSNELNNTDKIGIFINECHRMEIEILPPDINKSKLRFAPEAIPSGKLAI
RFGLAAIKNVGEGAMRTAIAERDKNGEFASLDDLSNRLDSKSVNKRILENLVKAGALDWT
GETRAAMFHRIEQVVASASSAQRDRAQGQVSLFDTMDFAGAAPAQEQGGGDTPEVEEWSK
DEKLANEKELLGCYTSGHPLDKYREVIDSDRFKKIGLLDELDTKDKRARYPFAGMIRHVE
HKVTRKGKPFGVLHIEDFTGNCEVVCWSESYSPAREAGLLMSGSVIRLKANVQVDERTES
LRLTGSEIKELKARAPGKNGAVQVTLWVARHSEDDLMNIRKVLQQHPGTTPVEIHLQSGT
GKRATIEAGEKLRVKKCAALNQSLAEWME
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcctttgtccaccttcacgtccacacggagtattccaccctcgactccact
gttcgtactaaggcacttgtcgcccgagccgtggagctgaatatgcccgccgtggcgatg
acagaccacgggaatctctacgccgccgtcgaattttatcaaaatgccacccgcgccggc
gtcaaacccatcctcggctgcgaaatctacctcgcacccgcctcgctctacgacaaggtg
gaaacccccggtcgcaagaattcctcccacctcaccctcttagccaaaaacgaaaccggc
tggaagaacctcgttaagctgatctccatcggccacctcgatggcgactacctcggcgaa
ccacgggtcgatcgcgaacagctcgccaaattttccgaaggactgatctgtctctccggc
tgcatcaacggcgccgtcaacgaatggctgcagaaaaaagacctcgatgccgcccgcgcc
gaagccatcgccctgcgcgatatgttcggccccgatgacttttacctcgaactcaacgac
cagagcctggaaatccagcaggaactcaacaagcagctaaaggcactttccgaagaactc
ggcgttaaactcgtcgccaccaatgacgtccacttcctgaacaaggaggactcagaggcg
cacgatgtgctgatctgcatcggccaagggcgcctcttgttagacgaaaaccgcaagagt
tacccagtcgatcactacttcaaaactcccgaggaaatgcgcgagctcttcgccgatttc
cccggcgcctgtgacaacaccctcgagattgctgaaaaatgtaacgtcgaaatggtgctg
gatgccaccagctctgaaaaatacccgcagttcgaatctcccgacggatcaccgcgggag
gagtatttccgcaaggtttgtttcgatggtctggccagccgctacgccaacggcaaactc
gaaaaactcgccgaaggactgaaaaaaacaccggaggaaatgcagaaggtgttagatgag
cggctcgattacgagatcaagacgatcaacgacctcggattcgcctcctatttcttgatc
accgcggacttcattcagtggggacgcgataacgacatccccgtaggaccgggccgtggt
tccgccgccggttcgctggtggcttacaccatgggcatcaccgatatttgccccatgcgt
ttcggcctgctcttcgaacgattcctcaacccggagcgtgtcagtccgcccgacgtggat
attgatttctgtcagacccgacgcaccgaggtcatcgaatacgtgcgtcaaaaatacggg
gagcgttccgtttcccacatcattacctacggaaccctcggcgcgaaaagtgtcatccgc
gatgtctcccgtgtcatgggtatcagctacggcgatgccgacatgctggcaaaaatgatc
gaggcgaaaccgggcgtcaaactccaaggcgagtatgatgagaagcaagagctgcgcgac
atcatcgagaacagcagcacctggcaagacctctggggctatgccatcaaactcgaaggg
gtgaaacgaaacaccggtgtgcacgccgccggtgtcgtgatcggtgaccgcgcgctcgat
gaacactgcgccctaacaagaggtaacgaaggtgaggtcgtcacccaggcagacatgaac
tccatcaccgagttaggcctgttaaaaatggacttcctcggtctgaaaaacatgaccgtc
atccaggatgccgtgaaccacattcgcgagcacacacctgatttcgatatcaacgaaatc
tcgctggaagacaaacccactcttgccctgctgaaccgcggtgaaaccatgggcgtgttc
cagctggaatccggcggtatggtcgagacctgccgcaagtatggcatcgataaaattgac
gacatcattgaccttctcgcgctctaccgtccgggtgccatggactacatcgatcagatg
atcgaggtgaaaaaaggcatcaaaccagtgcgctacgagcacccgctgttagaagtgatc
tgtggcgatacctacggcgtcatgatctatcaggagcaggtgcagaacgcggccaagatg
ctcgccggttacaccctcggtggtgcggatattctgcgccgtgcgatgggtaagaaaaaa
cccgaggaaatggcgaagcagcgcgagatcttcgtggccggtgccaaggaaaccaacgat
atcgacgctcctctggcgaaccagattttcgataagatcgccggtttcgccggttatggc
ttcaacaaatctcactccgcctgttacggccacatttcctactggaccgcctacttgaag
gcgaaccatccggtcgagttcatgtccggcctgctctctaacgaactcaataacacggac
aagatcggcatcttcatcaacgagtgccatcgcatggaaattgagatcctgccgccggac
atcaataaatccaaactccgcttcgcacccgaagccatcccatccggcaagctcgccatc
cgcttcggcctcgccgcgatcaaaaacgtgggcgagggagccatgcgcaccgccatcgcc
gaacgcgataaaaacggtgagttcgccagcttggacgacctgtctaacaggctcgactcc
aaaagcgtcaacaagcgcatcttggaaaacttggtcaaagccggcgcgctcgactggacg
ggtgaaactcgcgcagcgatgttccaccggatcgagcaagtggtggcctctgccagctcc
gcccagcgcgatcgcgcacaaggccaggtttcacttttcgacaccatggatttcgccggt
gccgcgcccgctcaagagcaaggcggcggtgacacccctgaggttgaggagtggagtaag
gatgaaaaactggccaatgagaaagagctgttaggatgctacaccagtggccatccgctg
gacaaataccgcgaggtcatcgactcggatcgcttcaaaaagatcggcctgttagacgaa
ctcgacaccaaggataaacgcgcgcgctaccccttcgccggcatgatccgccacgttgaa
cacaaggtcacccgcaagggcaaacccttcggcgtgctgcacatcgaggatttcaccggc
aactgtgaggtggtctgttggtcggaaagctactcccctgcccgcgaggccggcctgctg
atgtccggcagcgtcatccgcctgaaggccaacgtgcaggtagatgagcgcactgaatct
ttacgcctcacgggatccgaaatcaaagaactcaaagcccgcgcccctggaaagaacggc
gcggtgcaagtcactctctgggttgcccgccacagcgaggatgatctaatgaacatccgc
aaagtgctgcagcagcaccccggaacaacacctgttgagatccatcttcagagcggtact
ggtaaacgcgccaccatcgaagccggagaaaaacttcgggtgaaaaaatgcgccgccctg
aaccagagtttggcggagtggatggagtaa
DBGET
integrated database retrieval system
