KEGG   Oceaniferula spumae: NT6N_29460
Entry
NT6N_29460        CDS       T11191                                 
Symbol
rtcB_2
Name
(GenBank) RNA-splicing ligase RtcB
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
osu  Oceaniferula spumae
Brite
KEGG Orthology (KO) [BR:osu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osu03016]
    NT6N_29460 (rtcB_2)
Enzymes [BR:osu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     NT6N_29460 (rtcB_2)
Transfer RNA biogenesis [BR:osu03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    NT6N_29460 (rtcB_2)
 Prokaryotic type
   tRNA splicing ligases
    NT6N_29460 (rtcB_2)
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: BDS07906
UniProt: A0AAT9FPT3
LinkDB
Position
complement(3384365..3385933)
AA seq 522 aa
MKPLTGQDLIDAGWEAGPQIAEMLIKIDEYQARGIHDAKYMLKLLKRDFTPPPPKAIMRD
KPAPYSEAIRPETKEEKKNVASVRQKMDELLKTPVISRGAIMPDACPASMGKAVIPVGGA
IAVENAIIPSAHSADVCCSMYATFYHPRSEVASELDALTTATRFGPGGRHMDDLVHHPVL
DEDVWDNKFLNGLYDWAKVHIADQGDGNHFAYLGEVDISNKLIEKLRSNGHEQLAKHFEQ
AHSHREGPAQEPLTLRVLVTHHGSRGLGAKLYKRGQIAAVKHTARIGNHIPSAAAWLEAD
SEIGQEYWEALQYVGRWTRANHQAIHTRFLERIGSEAVAEFGNEHNFVWKRGNTYYHGKG
ATPAWKDDNGNPLLGLIPLNMAEPILMVLGSDNEEHLSFAPHGAGRNISRTALKRQFPDE
ASQRNAIRHYTKDIDVRWYCGDPDLSETPIAYKNADHVTAQIEEFGLAEVIAKIHPLGCI
MAGNKHRGPWRKEDILTPKQQRQIQHRAERRRVRQDLHQEEG
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgaaacccctcacaggacaagacctcatcgacgcaggctgggaagccggaccgcagatc
gctgagatgctgattaaaatcgacgagtatcaagctcgcggcatccatgatgccaaatac
atgctcaagctcctcaagcgcgacttcactccaccgccgccaaaggcaatcatgcgtgac
aagcctgccccctattccgaggcgatccgcccagaaaccaaggaggagaaaaagaacgtc
gcctccgtacgccagaaaatggatgagcttctcaagactcccgtgatctcacgtggtgcc
atcatgccggacgcctgccccgcctccatgggtaaggcagtgataccggtaggtggagct
attgcggtcgaaaatgcaatcatcccaagtgctcactcggccgatgtttgctgctcgatg
tatgcgaccttttaccatcctcgtagtgaggtggccagtgaactggacgccctcacgaca
gctacccgattcggcccaggcggtcggcatatggacgaccttgttcaccacccggtgtta
gatgaggacgtctgggataataaattcctcaacggtctatacgactgggcaaaagtccac
atcgcggatcaaggtgacggcaaccactttgcttacctcggcgaggtcgacatttctaac
aaactcatcgaaaaactccggagtaatggtcatgaacagttggccaagcacttcgagcaa
gcacacagccatcgcgaaggtcctgcacaggaaccactcacactgcgtgtgctggtgact
caccatggttcgcgcggacttggagcgaagctctacaagcgcggccagattgccgccgtg
aaacatacagcaagaattggaaatcatatccctagcgctgccgcttggctagaggctgat
tcggaaatcggtcaagaatactgggaggcactgcaatacgtaggtcgctggaccagagcg
aaccatcaggccatccacacccgcttcctagaacgcatcggcagcgaagccgtcgctgag
tttggtaacgaacacaacttcgtctggaaacgaggaaacacctactaccacggaaaaggt
gctactccagcatggaaagacgacaacggcaaccctctgttaggacttatcccactcaat
atggcagaacccattctgatggtgttaggctctgacaatgaagagcatctctccttcgct
ccgcatggagccgggcgaaacatctcccgcactgctctcaagcgccagttccctgacgaa
gcatctcaacgcaacgcaatccgccactacaccaaggacatcgacgtccgctggtactgc
ggcgaccctgacctgagcgaaacccccatcgcctataagaacgccgatcacgtcaccgcc
cagatcgaagagttcggcctcgccgaagtcatcgccaaaatccatcccctaggctgtatc
atggccggcaacaaacaccgcggcccgtggcgcaaggaagacatcctcactcccaaacaa
caacgccaaatccagcaccgcgccgaacgccgaagggtgaggcaagacctgcatcaggag
gaaggatag

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