Oceaniferula spumae: NT6N_29880
Help
Entry
NT6N_29880 CDS
T11191
Symbol
xylR_2
Name
(GenBank) XylR family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
osu Oceaniferula spumae
Brite
KEGG Orthology (KO) [BR:
osu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osu03000
]
NT6N_29880 (xylR_2)
Transcription factors [BR:
osu03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NT6N_29880 (xylR_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
HTH_18
HTH_AraC
TetR_N
Peripla_BP_4
HTH_23
CBM_11
PBP1_XylR
Motif
Other DBs
NCBI-ProteinID:
BDS07948
UniProt:
A0AAT9FPS5
LinkDB
All DBs
Position
3446365..3447417
Genome browser
AA seq
350 aa
AA seq
DB search
MRSEDCDWEVWVMPMIHEKRQLKDCLKGRDIAGVIARGLKPELQSFLQQSGIPLVAIRGV
ETSDDDRSNGPHVDDEAIGGKAGGEFQYLNLGYWGFVHWQGVAWSEARRQSFQAYADSQG
AKNSTLSLSQDERHCWDGVMKILDWLKGLSKPCGVLACNDEAGLDVLHACQLAGFSVPEQ
VAVIGVDNDRLLCESTVPPLSSIDLHAADVGKAAARQLRDLLGGDDGKEIHISQASMVVR
ESSHEIDRYLLTYQKAMDVISAKAVGGTSVAEVAGDCGVSRRGLERAFEKYSNESPAGVI
RQQRLSAIIHLLKSQPVSLEHLAQQTGFSDSAGLSNFIKRMTGKAPGAFR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcagaggactgtgattgggaggtgtgggtgatgcctatgattcacgaaaaacga
cagttgaaggactgtttgaaggggcgtgacatcgccggtgtcatcgcgcgcggtctcaaa
cccgaactgcaatcgtttttacaacagtcgggtattccactcgtcgccatccggggagtg
gaaaccagcgacgacgaccgatccaatggtccccacgtcgatgacgaagcgataggcggc
aaggccggcggcgaatttcaatatctcaacctcggttactggggctttgtgcactggcaa
ggcgtcgcttggtcggaagcacggcgacagtcatttcaggcctatgccgattcgcagggg
gcaaaaaacagcactctctcgctgtcgcaggacgaaagacattgctgggacggtgtgatg
aaaattctggattggctgaagggcttatccaaaccctgcggagttttggcctgcaatgat
gaagctggcttggatgttctccatgcgtgtcagttagctggattcagtgtgcctgaacaa
gtagccgtaattggtgtggataatgatcgcttgctctgtgagtcgaccgtgcctccactg
agtagtattgaccttcacgccgctgacgttgggaaagccgcggctcgtcagttgcgagat
ttgttaggtggcgatgacggtaaggaaattcatatcagtcaggcatccatggtggttcga
gagtcgagccatgagatcgatcgatacctgctcacctatcagaaagcgatggatgtgatc
tcggctaaggcagtgggagggacttccgtcgcagaggtcgcaggcgactgtggagtgtcg
cgtcgagggctggaaagagcctttgaaaaatactcgaacgagagccctgcgggtgtgatc
aggcagcaacggttgtcagccatcattcatctgttgaagagccagccagtgagtttggag
cacttggctcagcaaaccggattctcggattcagccggtctttcaaacttcatcaaacgt
atgaccggtaaggctccgggcgcgtttagatga
DBGET
integrated database retrieval system
