Oceaniferula spumae: NT6N_34370
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Entry
NT6N_34370 CDS
T11191
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
osu Oceaniferula spumae
Pathway
osu00550
Peptidoglycan biosynthesis
osu01100
Metabolic pathways
osu01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
osu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NT6N_34370 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NT6N_34370 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
osu01011
]
NT6N_34370 (mrdA)
Enzymes [BR:
osu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NT6N_34370 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
osu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NT6N_34370 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BDS08397
UniProt:
A0AAT9FQY6
LinkDB
All DBs
Position
complement(3961044..3963158)
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AA seq
704 aa
AA seq
DB search
MEPRYRLRLYLLTALILVGFGALLSRLYTYQIEERSRFLKQVPSNYTVTIREPGIRGDIT
DRNGVILAENQRNYEVVFNLDEIRADYKRYLIKTVGKDAVKDFRQIKTSKIVNEWVRPKL
ALHKLDTSYNTRSLDTHYITHGGLVPFTFRNDLTYNQFAHFAEHNLELPGVDVRVRPRRE
YLYGSLASHVLGYVKQWEKGAISPEEKRKFKHYTGDSTGIAGVEATMNGYLTGAEGIKTL
LKNEKGEVLQMVDYIKPDVGSRVELTIDARVQCLVENTLRRVGRAAAVVMDPNTGEVLAM
ASIPDFTPSYFVPSIDPDAWKNYNTNKGRPLVNKAINNFTPGSTFKLPTAIAAAMHGHAH
DVESCPGYVAYGNIQIRCWKRTGHGSLGLQESIQRSCNCYFMRIANEIGSKNMLTSFQLL
GLGMKTGIELPSESPGFIPGNRFWRTELRPGAAVTPSITGMMSIGQSDSASSPLQMAAVV
SAIANRGRYYKPRIVKRVIHPHNGVLVQNRPNLKVNLLQEGLKAEHLERIRKGMWMAANE
VGGTARRAAVKDKDVSAKTGTAQTVDMGIKSNDAWTVAFAPYDQPKYVVVVAVKRGTSGG
AVAGPLVHLIMRGLFASDEGLKLPLVKMKEFHGDFVVREKVELPDEGGLIDIAYEDGETG
DEVPNIPMAPPVADSQTPIIPKPTIKVEADAEGSQAPKAIIIEE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaaccacgttaccgcctcagactctatctactcactgctttgatccttgttgggttc
ggagcactgttgtcgaggctctacacgtatcagattgaggaacgctcgcgtttcctcaag
caggttccatcgaactacacggtcaccattcgcgagcctggcatccgcggtgatatcacc
gatcggaatggcgtcatcctcgctgagaaccagcgcaactacgaggtggtcttcaacctc
gacgaaatacgcgccgactacaaacgctacctgatcaaaaccgtgggtaaggatgcggtc
aaagatttccggcagatcaaaacatcgaaaatcgtcaacgaatgggtaaggcccaagctc
gcgctgcacaagctcgacacaagctataacacccgctcactcgacacccactacatcacc
cacggtggacttgttccattcacgtttcggaacgacctcacttacaatcagttcgcccat
ttcgcggagcataatctggagctacccggcgtcgatgtccgggtacgccctcgccgtgaa
tacctctacggctctctcgcatcccatgttctgggctacgtcaaacagtgggaaaaagga
gccatctctcctgaagaaaaacgcaagttcaagcactacaccggcgatagcacaggcatc
gctggcgtcgaggccaccatgaacggctacctcactggagctgagggcatcaaaacccta
cttaagaatgagaagggtgaggtgcttcagatggtcgactacatcaagcccgatgtcgga
tctcgcgtagagctcaccatcgatgcccgcgttcaatgccttgttgaaaacacccttcgt
cgtgtgggccgtgccgcagcagtggtgatggatcctaacaccggcgaagtcttggccatg
gcatccatccctgacttcacgccaagttacttcgtgccgagcatcgatccggatgcatgg
aaaaattacaacaccaacaaaggccgccctctggtcaataaggcgattaacaacttcacc
cccggctctaccttcaaacttcctaccgccattgctgcagccatgcatggccatgcgcat
gacgttgaaagctgccccggatatgtcgcctacggtaacattcagatccgctgttggaag
cggactggtcatggatcactcggcttgcaggagtccatccagcgctcatgtaactgctac
ttcatgagaattgccaacgagatcggcagtaaaaacatgctgacatcattccagctgtta
ggacttggaatgaagactggtattgaacttccctccgaatcccccggcttcattcctggc
aaccgtttctggagaactgaacttcgtccgggagccgctgtcaccccctcgatcaccggc
atgatgtcgattggtcagagcgacagtgcttcaagccctctgcaaatggccgcagtcgta
tcagccatcgccaatcgcggtcgttattataagccccggatcgtcaaacgtgtcattcat
cctcacaacggcgtcttggttcagaaccgccctaacctcaaagtcaacttgctccaagaa
ggtctgaaagctgaacacttggagcgcatccgcaaaggcatgtggatggcagccaatgaa
gtcggaggcacagcgcgccgcgcagccgtcaaggacaaggacgtctcagccaaaactggc
accgctcagaccgtggatatgggcatcaagtcaaacgatgcttggacggtagcattcgcc
ccttatgaccagccaaaatacgtcgtggtcgtcgccgtgaaacgcggcaccagtggaggt
gccgtcgcaggtccattggtgcacctgatcatgcgcggtctctttgccagcgatgaagga
cttaaacttcccttggtcaaaatgaaggaatttcacggagactttgtcgtccgtgaaaaa
gtcgaattacctgacgaaggcggcctcatcgatatcgcctacgaagacggcgaaactggc
gatgaggttcctaacatccccatggctcctccggttgccgattcccaaaccccaatcatc
cccaaacccaccatcaaagtcgaagctgacgccgaaggctcacaagctcccaaggcgatc
atcatcgaagaataa
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