Orbus sturtevantii: RHO12_00015
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Entry
RHO12_00015 CDS
T10535
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
osv Orbus sturtevantii
Pathway
osv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHO12_00015 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osv03019
]
RHO12_00015 (pnp)
03016 Transfer RNA biogenesis [BR:
osv03016
]
RHO12_00015 (pnp)
Enzymes [BR:
osv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RHO12_00015 (pnp)
Messenger RNA biogenesis [BR:
osv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RHO12_00015 (pnp)
Transfer RNA biogenesis [BR:
osv03016
]
Prokaryotic type
tRNA degradation factors
RHO12_00015 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
aRib
S1_RRP5
S1_2
DUF5813
Flagellin_IN
Motif
Other DBs
NCBI-ProteinID:
WVD67407
LinkDB
All DBs
Position
2037..4157
Genome browser
AA seq
706 aa
AA seq
DB search
MKLFNPTIQEFKYGRHTVKLETGVIARQATAAVMVNMDDTAVFVTVVAKPKAKEGQDFFP
LTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPLRPLFPEGFVNEIQIIATVV
SVNPQVSPDLVAMIGASAALSLSGVPFHGPIGAARVGFIDGEFVLNPLVTELPNSRLDLV
VAGTNSAVLMVESEADLLTEEQMLAAVVFGHDAQQVVIDNINELVAKAGHAKWDWTPPAK
NEALYNAVSEIAKARIGEAYRIIEKQARYAQIDAIKDDVLATLKAQNEELDDTTILNIVT
EIESQTVRQRVIAGEPRIDGREKDTIRALDIRTNVLPRAHGSALFTRGETQALVVATLGT
ERDAQIIDELTGEKTDKFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVAAVMPKN
GEFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSSVAGIAMGLVKEGDDFVVL
SDILGDEDHLGDMDFKVAGTREGVSALQMDIKIEGITKEIMQVALNQAKGARLHILGVME
QAINCPRSEISEFAPRIYTMKINPEKIRDIIGKGGSTIRALTEETGTTIEIEDDGTVKIA
ASDGDKAQAAIKRINDLTAEVEVGHIYAGKVVRIVDFGAFVSIIGGKEGLVHVSQIAEHR
VEKVTDELSAGQEVQVKVLEIDRQGRIRLSIKDAIANEQSVDNTAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atcaaattgtttaatccaactatacaagaatttaaatatggtcgccataccgttaaatta
gaaacgggtgttattgcgcgccaagcaacggctgctgtaatggtaaatatggacgatacg
gctgtatttgttacagttgttgctaagccaaaggcgaaagaaggacaagattttttccct
ttaacggttaactaccaagaaagaacctatgcagccggccgtattccaggcagttttttt
cgacgtgaaggtcgtccaagtgaaggcgaaacactaattgcacgtttaatcgatcgtcca
ttgcgaccattgttcccagaaggatttgttaatgagatccaaattattgcaaccgttgtt
tctgttaacccacaagttagccctgatttagttgcaatgattggtgcatctgcagcgtta
tctttatctggtgtacctttccatggaccaatcggtgccgcgcgtgttggtttcattgat
ggtgagtttgtattaaacccattagttactgaattaccaaatagccgtttagatcttgtc
gttgcaggtactaatagcgcggtattaatggttgaatcagaagctgatttattaactgaa
gaacaaatgcttgcagcggtagtatttggtcatgatgcgcagcaagttgttatcgataat
attaatgaattagtcgctaaagccggtcacgctaaatgggattggactccgccagctaaa
aatgaagcattatataatgcagttagcgaaattgctaaagcgcgcattggtgaagcttat
cgtattattgaaaaacaagctcgttatgctcaaattgatgcaattaaagacgatgtttta
gcgacattaaaagcacaaaacgaagagttagacgacacgactattcttaacattgtaact
gaaattgaaagtcaaaccgtacgtcaacgtgttattgctggtgagcctcgaatcgatggc
cgtgagaaagacactattcgtgcacttgatattcgaactaatgttttaccaagagcacac
ggtagtgcgctatttactcgaggtgaaacccaagcgctggttgttgcgacattaggtacc
gagcgtgacgcacaaattattgatgaattaacgggagagaaaacggataaattccttttc
cattataactttcctccatattcagtcggtgagaccggtatggttggctcacccaaaagg
cgtgaaattggtcatggccgtttagctaaacgtggtgttgccgcggtaatgcctaaaaat
ggtgaatttccttacacagtacgtgttgtttctgaaattacggaatcaaacggttcgtca
tcaatggcatcagtttgtggtgcatcacttgcattaatggatgctggtgtaccaattaaa
tcatcggttgcaggtatcgcaatgggtctggttaaagaaggtgatgactttgttgtttta
tctgatattttaggtgacgaagaccacttgggtgatatggattttaaagttgccggtact
cgtgagggagtaagtgcgctgcaaatggatatcaagatcgaagggatcactaaagagatt
atgcaagttgcattaaatcaggcaaaaggtgctcgtttacatattttaggtgtgatggaa
caagcaattaattgtccgcgtagtgagatttctgaatttgctccgcgtatctataccatg
aaaattaatccagaaaaaattcgtgatatcattggtaaaggcggttcaactattcgtgcg
ttaactgaagaaacaggtacaacaattgaaatcgaagatgatggtacagttaaaattgcc
gcatctgatggtgataaagctcaggctgcaattaagcgcattaatgatctaaccgctgaa
gttgaagttggtcatatttatgccggtaaagtagttcgtatcgttgattttggcgcattt
gtttcaattatcggtggtaaagagggcttggttcatgtatcacaaatcgctgagcatcga
gtagagaaagtaacagatgaattgagcgcagggcaagaggttcaagttaaagtgctcgaa
atcgatcgtcaaggacgtattcgtttaagtatcaaagatgcgattgcaaatgagcaatct
gtagacaataccgcagagtaa
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