Orbus sturtevantii: RHO12_00575
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Entry
RHO12_00575 CDS
T10535
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
osv Orbus sturtevantii
Pathway
osv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHO12_00575 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osv03021
]
RHO12_00575 (rho)
03019 Messenger RNA biogenesis [BR:
osv03019
]
RHO12_00575 (rho)
Transcription machinery [BR:
osv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RHO12_00575 (rho)
Messenger RNA biogenesis [BR:
osv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RHO12_00575 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA
AAA_25
S1CSD-TOTE-2
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
WVD66283
LinkDB
All DBs
Position
132252..133514
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTELKTKSVSELIALGEKTMGLENLARLRKQDIIFAILKQHAKSGEDIFGDGVLEILQ
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEV
NHDKPEDARNKILFENLTPLHANSRLRMERGNGSTEDLTTRVLDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSLATNYPECELMVLLIDERPEEVTEMQRLVKGEVIASTFDEPAARH
VQVAEMVIERAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKILTGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELQLSRKIAERRVFPAID
FNRSGTRKEELMTSPDELQKMWILRKILNPMGEIDAMEFLIDKLSMTKTNEEFFDMMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaactgaactgaaaacaaaatctgtatctgagcttatcgcgctcggtgaaaaa
acgatgggtctggaaaatttagctcgtctacgtaaacaagatattatttttgcaatttta
aaacaacatgcgaaaagtggtgaagacatttttggcgatggtgtattagagattttgcaa
gatggctttggctttttgcgctcggcagatagctcttatttagctggtcctgatgatatt
tatgtctcgccaagccaaattagacgatttaatttaagaacaggtgatacgatatcaggc
aagataaggccacccaaagaaggtgaacgttattttgctttactaaaagttaatgaagtt
aaccatgataaacctgaagatgcccgcaataaaattctctttgaaaacttaaccccttta
catgctaattcaagacttcgaatggaacgaggtaacggctctactgaagatttaaccact
cgagtattagatttagcctcaccaataggtaaaggtcaacgtggtttaatcgttgcaccg
cctaaagccggtaagacgatgttgctacaaaatatagcgcaaagcttagcaactaactat
cctgaatgtgagttgatggtattactaattgatgaacgtccagaagaagttactgaaatg
cagcgtttggttaaaggtgaagttattgcttcaacatttgatgaacctgcggctcgtcat
gtacaagtggctgaaatggtgattgaacgcgctaagcgtttagttgaacataaaaaagat
gtgattattttgctggattcaatcacgcgtttagctcgtgcttacaacactgtggtgcct
gcttcgggtaaaatcttaacgggtggggttgatgctaatgcactacaccgaccaaaacgc
ttctttggggcagcgcgtaatgttgaagaaggcggcagtctaactattattgcaacagca
ttagttgatactggttcaaaaatggatgaagtcatttacgaagagtttaaaggtaccggt
aatatggaactgcaactttcacgtaaaattgccgaacgccgcgtattccctgcgatcgat
tttaaccgttctggtacacgtaaagaagagctcatgacatcccctgacgaattacaaaaa
atgtggattttacgtaaaattcttaatccaatgggtgagattgatgcgatggagttctta
attgataaattatcaatgaccaaaaccaatgaagagttctttgatatgatgaagcgttca
taa
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