Orbus sturtevantii: RHO12_03830
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Entry
RHO12_03830 CDS
T10535
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
osv Orbus sturtevantii
Brite
KEGG Orthology (KO) [BR:
osv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osv03032
]
RHO12_03830 (topA)
03400 DNA repair and recombination proteins [BR:
osv03400
]
RHO12_03830 (topA)
Enzymes [BR:
osv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RHO12_03830 (topA)
DNA replication proteins [BR:
osv03032
]
Prokaryotic type
DNA Topoisomerases
RHO12_03830 (topA)
DNA repair and recombination proteins [BR:
osv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHO12_03830 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Zn_ribbon_Top1
Toprim
Toprim_2
Zn_ribbon_recom
Zn_ribbon_LysW
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
WVD66913
LinkDB
All DBs
Position
complement(866154..868766)
Genome browser
AA seq
870 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKEYIVKSSIGHIRDLPVSGNKSASASEETKKATGKKIK
RSPEQVLVDRMGVDPYHDWQANYEILPGKSKVVAELKKLAKDADTIYLATDLDREGEAIA
WHLKEVIGGEDDKYRRVVFNEITKAAIQNAFKKPSLLDIDRVNAQQARRFMDRVVGFMLS
PLLWKKVARGLSAGRVQSVAVALVVEREREIHAFIPQEYWDLYADLNTNAKDKLVMQVTH
FKDKAFEPKDRIAIDMALDELNNCQYHIKNIEEKPTKSNPTAPFITSTLQQAASTRLGFG
VKKTMTLAQRLYEAGYITYMRTDSTNLSQDALSMVRGYVEKEFGKKYLPEKPNFYTSKQN
SQEAHEAIRPSDVSLLGEQLTDLELDARKLYQLIWRQFVACQMTSAEYSSTTISAQAGNF
TLKAKGRTLRFDGWTKVQPQLIKNSDDKILPSVALNEMLELLTLTPTQHFTKPPARYNEA
SLVRELEKRGIGRPSTYATIISTIQDRGYVRLDSRRFYAEKIGEIVTDRLKENFNDLMSY
DFTARMEDTLDDVANKKNDWKQVLNTFFADFSSHLEIAEKEPNNGGMQLNPLVLTPEIKC
PNCQREMGIKTASTGVFLACSGYSLPPKERCKQTINLIPEHEALNILEDDSENSTAETEA
LRARKRCPKCHTAMDSYLLDNSHKLLICGNNPICDGFLVEEGSFKIKTYEGPIVECDKCG
SEMHLKSGRFGLYMGCTNPECKNTRKILKNGDVAPPKEEPVDLPELKCSKSDAHFMLRDG
ASGIFLAAHNFPKSRETRAPLVAELKRFKDRLPTKFIYLTQAPDKDPDGNDAIIRFSRKN
KQQYVTSEVNGKSTGWVMNYIDSKWVNSKK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatccctagtaattgtggaatcaccagcaaaagcaaagacaattaataaatat
cttggaaaagagtatattgttaaatcgagtattggtcatatccgcgatctgcctgttagc
ggaaataagtcggcaagcgcatcagaagagactaaaaaagcgacgggtaaaaagataaaa
cgttcaccagaacaagtccttgttgatcgtatgggcgtagatccttaccatgattggcaa
gctaattatgaaattttgccaggcaaaagcaaggttgtcgccgaactaaaaaaactagcc
aaagatgctgacacaatttatctcgcaaccgacttggatagagaaggggaagccattgct
tggcatctaaaagaagtgataggtggcgaagatgacaaatatcgtcgagtggtatttaat
gaaattactaaagctgcaatccaaaatgcgtttaaaaaacccagcttacttgatattgat
cgcgttaatgcacaacaagctcgtcgttttatggatagagtcgttggttttatgttatcg
ccactgttgtggaaaaaagtggccagaggcttatcggcagggcgagttcaatcggttgcg
gttgcgttagttgttgaacgtgaacgtgaaatccatgcgtttattccgcaagaatattgg
gatctttatgctgatttaaacactaatgctaaagataagcttgtcatgcaagtgactcac
ttcaaagataaagcattcgagcccaaggatcgcattgcaatcgatatggcattagatgag
ctaaataactgccaataccacatcaaaaatattgaagaaaagccaacaaaaagtaatccc
acagcgccattcatcacctctaccctgcagcaagcagcaagtactcggcttggttttggc
gtgaaaaaaaccatgacgttggctcagcgtttgtatgaggcaggttatattacttatatg
cgtacagactccacgaatctaagtcaagatgcgctaagtatggttagaggctatgttgaa
aaagaatttggcaaaaagtatttaccagaaaaacctaacttttataccagtaagcaaaac
tcgcaagaggcacatgaagcaattcgtccatcagatgtgtcattattgggtgagcagttg
actgatcttgaattagatgcacgtaaattatatcaacttatttggcgtcaatttgtggcg
tgtcaaatgacttcagcagagtatagttctaccactattagtgctcaagcgggtaatttc
accttaaaggcgaaaggaagaacactgcgttttgacggctggacaaaggtgcaaccacag
ttaattaaaaatagtgatgataaaattttaccgtcagttgcgctaaatgaaatgctcgaa
cttttaacgctaactcccacacaacatttcactaaaccgcctgcacgttataacgaagcc
tctttagtccgtgagcttgaaaaacgcggaataggccgtccgtcgacttacgcaacaatt
atttcaacaatacaagatcgtggttatgtaaggcttgatagccgacgtttttatgctgaa
aaaattggtgaaattgttaccgaccggttaaaagaaaattttaatgacttaatgagttat
gattttactgcacgtatggaagatacgcttgatgatgtagcaaataaaaagaatgattgg
aagcaggtcttaaataccttttttgctgatttttcatctcatcttgagatcgccgaaaaa
gagccaaacaatggcggtatgcaattaaatccattagttttaacgcctgaaataaaatgc
ccgaattgtcagcgtgaaatgggtattaaaacggctagtactggcgtgtttttagcgtgt
tcaggatatagtttgccgcctaaagagcgttgcaaacaaaccattaatttaattcctgaa
catgaagcgcttaatattttagaagatgatagcgaaaatagcacggctgaaactgaagca
ttgcgcgctcgtaaacgttgcccaaaatgtcatacagcaatggatagctacttactagat
aatagccataaattattgatctgtggaaataatcctatttgtgatggttttcttgtcgaa
gaaggtagcttcaaaattaaaacatatgaaggtccgattgttgaatgtgataaatgtggt
agcgagatgcacctaaaatcgggacgttttggtctatatatgggatgtactaatcctgaa
tgtaaaaatacgcgcaaaattctaaaaaatggcgatgtcgcacctccaaaagaagagccg
gttgatttgcctgaactaaaatgtagcaaatcagatgctcactttatgctacgcgatgga
gcttctgggattttcttagcagcacataatttccctaaatcgagggaaacaagagcgcca
ctcgtcgctgaattaaaacgctttaaagaccgtttgccaacaaaatttatttatttgacc
caagcgccagataaagatcctgatggtaatgatgcaatcatccgttttagccgtaaaaac
aaacagcagtatgtgacatcagaagtgaatggtaagtctacgggttgggtaatgaactat
atcgatagtaaatgggtcaatagcaagaaataa
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